Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Scn2bQ56A07 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn2bQ56A07 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scn2bQ56A07 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Scn2bQ56A07 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Scn2bQ56A07 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Scn2bQ56A07 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.69□□□□□ -0.22
Scn2bQ56A07 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.69□□□□□ -0.22
Scn2bQ56A07 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn2bQ56A07 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.68□□□□□ -0.22
Scn2bQ56A07 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.68□□□□□ -0.22
Scn2bQ56A07 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.68□□□□□ -0.22
Scn2bQ56A07 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Gm13823-201ENSMUST00000119930 345 ntBASIC13.68□□□□□ -0.22
Scn2bQ56A07 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Scn2bQ56A07 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.68□□□□□ -0.22
Scn2bQ56A07 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.68□□□□□ -0.22
Scn2bQ56A07 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn2bQ56A07 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.67□□□□□ -0.22
Scn2bQ56A07 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms