Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
R3hdm4Q4VBF2 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.9□□□□□ -0.02
R3hdm4Q4VBF2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
R3hdm4Q4VBF2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
R3hdm4Q4VBF2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
R3hdm4Q4VBF2 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
R3hdm4Q4VBF2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
R3hdm4Q4VBF2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
R3hdm4Q4VBF2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
R3hdm4Q4VBF2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.9□□□□□ -0.02
R3hdm4Q4VBF2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
R3hdm4Q4VBF2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
R3hdm4Q4VBF2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
R3hdm4Q4VBF2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
R3hdm4Q4VBF2 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.87□□□□□ -0.03
R3hdm4Q4VBF2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms