Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Gm15371-201ENSMUST00000117057 784 ntBASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Gm6266-201ENSMUST00000203844 806 ntBASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Gm6983-201ENSMUST00000214912 628 ntBASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 Gm15824-201ENSMUST00000119516 955 ntBASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 Gm7287-201ENSMUST00000205267 602 ntBASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.11■□□□□ 0.17
Prpf38aQ4FK66 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf38aQ4FK66 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf38aQ4FK66 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Prpf38aQ4FK66 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf38aQ4FK66 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf38aQ4FK66 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf38aQ4FK66 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf38aQ4FK66 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf38aQ4FK66 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.09■□□□□ 0.17
Prpf38aQ4FK66 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.09■□□□□ 0.17
Prpf38aQ4FK66 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.09■□□□□ 0.17
Prpf38aQ4FK66 Gm44397-201ENSMUST00000195950 113 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms