Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Gm11425-201ENSMUST00000119608 498 ntBASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Gm9396-201ENSMUST00000076703 567 ntBASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Gm10478-201ENSMUST00000084451 396 ntBASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Tmem40Q4FJU9 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.83□□□□□ -0.51
Tmem40Q4FJU9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Gm5035-201ENSMUST00000215581 927 ntBASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Sybu-209ENSMUST00000228639 4113 ntBASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Tmem40Q4FJU9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms