Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Gm6091-201ENSMUST00000098307 165 ntBASIC17.11■□□□□ 0.33
Usp48Q3V0C5 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp48Q3V0C5 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp48Q3V0C5 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Usp48Q3V0C5 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp48Q3V0C5 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp48Q3V0C5 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp48Q3V0C5 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp48Q3V0C5 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp48Q3V0C5 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp48Q3V0C5 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 AL645783.1-201ENSMUST00000221416 1832 ntBASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Gm2495-201ENSMUST00000191160 466 ntBASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Gm9299-201ENSMUST00000206392 1140 ntBASIC17.1■□□□□ 0.33
Usp48Q3V0C5 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Gm45779-201ENSMUST00000212189 4064 ntBASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp48Q3V0C5 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Gm5940-201ENSMUST00000117582 1068 ntBASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Gm7399-201ENSMUST00000032395 858 ntBASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp48Q3V0C5 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Usp48Q3V0C5 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp48Q3V0C5 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp48Q3V0C5 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.08■□□□□ 0.33
Usp48Q3V0C5 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.08■□□□□ 0.33
Usp48Q3V0C5 Gm42690-201ENSMUST00000197921 1836 ntBASIC17.08■□□□□ 0.33
Usp48Q3V0C5 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Usp48Q3V0C5 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Usp48Q3V0C5 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp48Q3V0C5 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC17.08■□□□□ 0.32
Usp48Q3V0C5 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC17.08■□□□□ 0.32
Usp48Q3V0C5 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp48Q3V0C5 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.08■□□□□ 0.32
Usp48Q3V0C5 Gm29649-201ENSMUST00000185649 419 ntBASIC17.08■□□□□ 0.32
Usp48Q3V0C5 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.08■□□□□ 0.32
Usp48Q3V0C5 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.08■□□□□ 0.32
Usp48Q3V0C5 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms