Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Gm27628-201ENSMUST00000184911 107 ntBASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim40Q3UWA4 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Mir5126-201ENSMUST00000175513 77 ntBASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim40Q3UWA4 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim40Q3UWA4 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim40Q3UWA4 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim40Q3UWA4 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim40Q3UWA4 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim40Q3UWA4 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim40Q3UWA4 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim40Q3UWA4 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Trim40Q3UWA4 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim40Q3UWA4 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trim40Q3UWA4 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
Trim40Q3UWA4 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim40Q3UWA4 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim40Q3UWA4 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim40Q3UWA4 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trim40Q3UWA4 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim40Q3UWA4 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim40Q3UWA4 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms