Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Znf48Q3US17 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Znf48Q3US17 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.54□□□□□ -0.56
Znf48Q3US17 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Znf48Q3US17 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.54□□□□□ -0.56
Znf48Q3US17 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.53□□□□□ -0.56
Znf48Q3US17 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Znf48Q3US17 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Znf48Q3US17 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Znf48Q3US17 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.53□□□□□ -0.56
Znf48Q3US17 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC11.53□□□□□ -0.56
Znf48Q3US17 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.53□□□□□ -0.56
Znf48Q3US17 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.53□□□□□ -0.56
Znf48Q3US17 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.53□□□□□ -0.56
Znf48Q3US17 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Gm28631-201ENSMUST00000190740 334 ntBASIC11.53□□□□□ -0.56
Znf48Q3US17 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.53□□□□□ -0.56
Znf48Q3US17 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Znf48Q3US17 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Znf48Q3US17 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.53□□□□□ -0.56
Znf48Q3US17 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Znf48Q3US17 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Znf48Q3US17 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Znf48Q3US17 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Znf48Q3US17 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Znf48Q3US17 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.52□□□□□ -0.56
Znf48Q3US17 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Znf48Q3US17 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.52□□□□□ -0.56
Znf48Q3US17 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Znf48Q3US17 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Znf48Q3US17 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.52□□□□□ -0.56
Znf48Q3US17 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Znf48Q3US17 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Znf48Q3US17 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Znf48Q3US17 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Znf48Q3US17 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Znf48Q3US17 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.52□□□□□ -0.57
Znf48Q3US17 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Znf48Q3US17 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Znf48Q3US17 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.52□□□□□ -0.57
Znf48Q3US17 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Znf48Q3US17 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.52□□□□□ -0.57
Znf48Q3US17 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Znf48Q3US17 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Znf48Q3US17 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Znf48Q3US17 Gm6912-201ENSMUST00000117218 544 ntBASIC11.52□□□□□ -0.57
Znf48Q3US17 Defa-ps4-201ENSMUST00000118021 183 ntBASIC11.52□□□□□ -0.57
Znf48Q3US17 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Znf48Q3US17 Gm23984-201ENSMUST00000157139 203 ntBASIC11.52□□□□□ -0.57
Znf48Q3US17 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Znf48Q3US17 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Znf48Q3US17 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Znf48Q3US17 Gm27680-201ENSMUST00000184192 160 ntBASIC11.52□□□□□ -0.57
Znf48Q3US17 Gm43452-201ENSMUST00000201873 991 ntBASIC11.52□□□□□ -0.57
Znf48Q3US17 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.52□□□□□ -0.57
Znf48Q3US17 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.52□□□□□ -0.57
Znf48Q3US17 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Znf48Q3US17 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Znf48Q3US17 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Znf48Q3US17 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Znf48Q3US17 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Znf48Q3US17 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Znf48Q3US17 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Znf48Q3US17 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Znf48Q3US17 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Znf48Q3US17 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms