Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Gm44832-201ENSMUST00000208849 2303 ntBASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Gm27552-201ENSMUST00000183351 62 ntBASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Gm27844-201ENSMUST00000183613 62 ntBASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Gm7003-201ENSMUST00000195089 312 ntBASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Gm7848-201ENSMUST00000210739 718 ntBASIC12.61□□□□□ -0.39
Spg11Q3UHA3 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Gm12029-201ENSMUST00000120073 832 ntBASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Gm12363-201ENSMUST00000122250 668 ntBASIC12.6□□□□□ -0.39
Spg11Q3UHA3 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Gm44405-201ENSMUST00000198952 126 ntBASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Gm45224-201ENSMUST00000208203 414 ntBASIC12.6□□□□□ -0.39
Spg11Q3UHA3 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Gm8894-201ENSMUST00000074642 666 ntBASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Spg11Q3UHA3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Gm8365-201ENSMUST00000197334 648 ntBASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.59□□□□□ -0.39
Spg11Q3UHA3 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Gm24749-201ENSMUST00000157838 343 ntBASIC12.59□□□□□ -0.39
Spg11Q3UHA3 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms