Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Gm46209-201ENSMUST00000217912 553 ntBASIC13.04□□□□□ -0.32
Brf2Q3UAW9 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Gm9229-201ENSMUST00000222777 126 ntBASIC13.04□□□□□ -0.32
Brf2Q3UAW9 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Brf2Q3UAW9 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Gm15460-201ENSMUST00000118147 391 ntBASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Gm22175-201ENSMUST00000175007 78 ntBASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Brf2Q3UAW9 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.02□□□□□ -0.32
Brf2Q3UAW9 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Brf2Q3UAW9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Brf2Q3UAW9 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Brf2Q3UAW9 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.02□□□□□ -0.32
Brf2Q3UAW9 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.02□□□□□ -0.32
Brf2Q3UAW9 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Brf2Q3UAW9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Brf2Q3UAW9 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Brf2Q3UAW9 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Brf2Q3UAW9 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Brf2Q3UAW9 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Brf2Q3UAW9 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Brf2Q3UAW9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Brf2Q3UAW9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Brf2Q3UAW9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Brf2Q3UAW9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.02□□□□□ -0.33
Brf2Q3UAW9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Brf2Q3UAW9 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Brf2Q3UAW9 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Brf2Q3UAW9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Brf2Q3UAW9 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Brf2Q3UAW9 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Brf2Q3UAW9 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Brf2Q3UAW9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Brf2Q3UAW9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Brf2Q3UAW9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Brf2Q3UAW9 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Brf2Q3UAW9 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms