Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim43aQ3TL54 Gm45612-201ENSMUST00000211320 160 ntBASIC14.68□□□□□ -0.06
Trim43aQ3TL54 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.68□□□□□ -0.06
Trim43aQ3TL54 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43aQ3TL54 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43aQ3TL54 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43aQ3TL54 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43aQ3TL54 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43aQ3TL54 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43aQ3TL54 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trim43aQ3TL54 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43aQ3TL54 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43aQ3TL54 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43aQ3TL54 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43aQ3TL54 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43aQ3TL54 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43aQ3TL54 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim43aQ3TL54 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43aQ3TL54 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trim43aQ3TL54 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43aQ3TL54 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43aQ3TL54 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43aQ3TL54 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43aQ3TL54 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43aQ3TL54 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43aQ3TL54 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Gm27494-201ENSMUST00000184735 189 ntBASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43aQ3TL54 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43aQ3TL54 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trim43aQ3TL54 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.65□□□□□ -0.06
Trim43aQ3TL54 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43aQ3TL54 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.65□□□□□ -0.06
Trim43aQ3TL54 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.65□□□□□ -0.06
Trim43aQ3TL54 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trim43aQ3TL54 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Trim43aQ3TL54 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43aQ3TL54 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43aQ3TL54 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43aQ3TL54 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trim43aQ3TL54 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43aQ3TL54 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43aQ3TL54 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.65□□□□□ -0.06
Trim43aQ3TL54 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Trim43aQ3TL54 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.65□□□□□ -0.06
Trim43aQ3TL54 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43aQ3TL54 Chchd1-203ENSMUST00000224633 557 ntBASIC14.65□□□□□ -0.06
Trim43aQ3TL54 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43aQ3TL54 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43aQ3TL54 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms