Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm5733-201ENSMUST00000190232 939 ntBASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 AC174678.1-201ENSMUST00000228007 2749 ntBASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Gm6397-201ENSMUST00000161973 1069 ntBASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ush2AQ2QI47 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Gm15003-201ENSMUST00000118884 446 ntBASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Gm18159-201ENSMUST00000174516 1070 ntBASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Gm7395-201ENSMUST00000216059 1045 ntBASIC7.12□□□□□ -1.27
Ush2AQ2QI47 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 AC115735.4-201ENSMUST00000227460 1944 ntBASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Gm5257-201ENSMUST00000121823 790 ntBASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Gm17798-201ENSMUST00000182282 1035 ntBASIC7.12□□□□□ -1.27
Ush2AQ2QI47 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Gng5-ps-201ENSMUST00000120931 205 ntBASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Gm8756-201ENSMUST00000183250 929 ntBASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Gm29304-201ENSMUST00000186555 695 ntBASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Gm29223-201ENSMUST00000188867 695 ntBASIC7.12□□□□□ -1.27
Ush2AQ2QI47 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Gm37921-201ENSMUST00000194333 695 ntBASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Gm1821-202ENSMUST00000227415 750 ntBASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 AC122197.2-201ENSMUST00000219196 1635 ntBASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Gm16202-201ENSMUST00000117532 544 ntBASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 AC153962.2-201ENSMUST00000219417 550 ntBASIC7.12□□□□□ -1.27
Ush2AQ2QI47 AC069562.3-201ENSMUST00000225387 587 ntBASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Ush2AQ2QI47 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Gm7851-201ENSMUST00000117574 323 ntBASIC7.11□□□□□ -1.27
Ush2AQ2QI47 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Gm10731-201ENSMUST00000181171 448 ntBASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Gm9916-201ENSMUST00000192943 1228 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms