Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
Chd8Q09XV5 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Gm37028-201ENSMUST00000194276 107 ntBASIC12.24□□□□□ -0.45
Chd8Q09XV5 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Gm18027-201ENSMUST00000218947 619 ntBASIC12.24□□□□□ -0.45
Chd8Q09XV5 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.24□□□□□ -0.45
Chd8Q09XV5 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.24□□□□□ -0.45
Chd8Q09XV5 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Gm12899-201ENSMUST00000120565 551 ntBASIC12.24□□□□□ -0.45
Chd8Q09XV5 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.24□□□□□ -0.45
Chd8Q09XV5 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.24□□□□□ -0.45
Chd8Q09XV5 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.24□□□□□ -0.45
Chd8Q09XV5 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.24□□□□□ -0.45
Chd8Q09XV5 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.23□□□□□ -0.45
Chd8Q09XV5 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Gm12218-201ENSMUST00000117666 399 ntBASIC12.23□□□□□ -0.45
Chd8Q09XV5 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.23□□□□□ -0.45
Chd8Q09XV5 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Gm13123-201ENSMUST00000122173 492 ntBASIC12.23□□□□□ -0.45
Chd8Q09XV5 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd8Q09XV5 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Chd8Q09XV5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd8Q09XV5 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd8Q09XV5 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.22□□□□□ -0.45
Chd8Q09XV5 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd8Q09XV5 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chd8Q09XV5 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd8Q09XV5 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd8Q09XV5 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd8Q09XV5 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd8Q09XV5 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd8Q09XV5 Gm11450-201ENSMUST00000121144 333 ntBASIC12.22□□□□□ -0.45
Chd8Q09XV5 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Chd8Q09XV5 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chd8Q09XV5 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Chd8Q09XV5 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.22□□□□□ -0.45
Chd8Q09XV5 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
Chd8Q09XV5 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd8Q09XV5 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Chd8Q09XV5 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.22□□□□□ -0.45
Chd8Q09XV5 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chd8Q09XV5 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd8Q09XV5 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms