Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tff1Q08423 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tff1Q08423 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tff1Q08423 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tff1Q08423 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.52□□□□□ -0.57
Tff1Q08423 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tff1Q08423 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Tff1Q08423 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.52□□□□□ -0.57
Tff1Q08423 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.52□□□□□ -0.57
Tff1Q08423 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Tff1Q08423 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tff1Q08423 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tff1Q08423 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.52□□□□□ -0.57
Tff1Q08423 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tff1Q08423 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tff1Q08423 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tff1Q08423 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tff1Q08423 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Tff1Q08423 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tff1Q08423 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tff1Q08423 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tff1Q08423 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tff1Q08423 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tff1Q08423 Gm22065-201ENSMUST00000103753 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm22066-201ENSMUST00000103761 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm24932-201ENSMUST00000103763 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm24115-201ENSMUST00000103799 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm22190-201ENSMUST00000103827 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm22191-201ENSMUST00000103831 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm24721-201ENSMUST00000103849 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm28018-201ENSMUST00000103869 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm26399-201ENSMUST00000103937 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Tff1Q08423 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Tff1Q08423 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tff1Q08423 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tff1Q08423 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.51□□□□□ -0.57
Tff1Q08423 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Tff1Q08423 Gm25349-201ENSMUST00000177728 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm23616-201ENSMUST00000177797 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm25871-201ENSMUST00000177816 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm24752-201ENSMUST00000178240 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm24496-201ENSMUST00000178287 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm25649-201ENSMUST00000178476 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm25548-201ENSMUST00000178681 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm23147-201ENSMUST00000178841 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm26095-201ENSMUST00000179270 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm22171-201ENSMUST00000179283 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm23936-201ENSMUST00000179354 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm22619-201ENSMUST00000179516 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm25255-201ENSMUST00000179579 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm24755-201ENSMUST00000179691 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm26506-201ENSMUST00000179692 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm25086-201ENSMUST00000179931 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm23243-201ENSMUST00000180047 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm24659-201ENSMUST00000180212 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm24169-201ENSMUST00000180244 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm23689-201ENSMUST00000180354 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm27359-201ENSMUST00000184153 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm27785-201ENSMUST00000184268 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm27466-201ENSMUST00000184396 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Gm27703-201ENSMUST00000184836 110 ntBASIC11.51□□□□□ -0.57
Tff1Q08423 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.51□□□□□ -0.57
Tff1Q08423 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.51□□□□□ -0.57
Tff1Q08423 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tff1Q08423 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Tff1Q08423 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tff1Q08423 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tff1Q08423 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tff1Q08423 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Tff1Q08423 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.51□□□□□ -0.57
Tff1Q08423 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tff1Q08423 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
Tff1Q08423 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tff1Q08423 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.5□□□□□ -0.57
Tff1Q08423 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.5□□□□□ -0.57
Tff1Q08423 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.5□□□□□ -0.57
Tff1Q08423 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.5□□□□□ -0.57
Tff1Q08423 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Tff1Q08423 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Tff1Q08423 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Tff1Q08423 Gm10275-202ENSMUST00000168697 495 ntBASIC11.5□□□□□ -0.57
Tff1Q08423 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.5□□□□□ -0.57
Tff1Q08423 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms