Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a1Q05722 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Col9a1Q05722 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a1Q05722 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a1Q05722 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a1Q05722 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a1Q05722 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a1Q05722 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a1Q05722 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.56□□□□□ -0.24
Col9a1Q05722 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.56□□□□□ -0.24
Col9a1Q05722 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC13.56□□□□□ -0.24
Col9a1Q05722 Gm7029-201ENSMUST00000173226 450 ntBASIC13.56□□□□□ -0.24
Col9a1Q05722 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Col9a1Q05722 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.56□□□□□ -0.24
Col9a1Q05722 Gm45856-201ENSMUST00000212752 416 ntBASIC13.56□□□□□ -0.24
Col9a1Q05722 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Col9a1Q05722 AC153899.1-201ENSMUST00000214092 1117 ntBASIC13.56□□□□□ -0.24
Col9a1Q05722 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.56□□□□□ -0.24
Col9a1Q05722 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.56□□□□□ -0.24
Col9a1Q05722 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC13.56□□□□□ -0.24
Col9a1Q05722 CT025538.2-201ENSMUST00000226083 772 ntBASIC13.56□□□□□ -0.24
Col9a1Q05722 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Col9a1Q05722 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a1Q05722 Tprkb-202ENSMUST00000089570 1216 ntTSL 5 BASIC13.56□□□□□ -0.24
Col9a1Q05722 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.56□□□□□ -0.24
Col9a1Q05722 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a1Q05722 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a1Q05722 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Col9a1Q05722 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a1Q05722 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.56□□□□□ -0.24
Col9a1Q05722 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a1Q05722 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Col9a1Q05722 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
Col9a1Q05722 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a1Q05722 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a1Q05722 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a1Q05722 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Col9a1Q05722 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a1Q05722 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a1Q05722 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a1Q05722 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a1Q05722 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a1Q05722 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a1Q05722 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col9a1Q05722 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Col9a1Q05722 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Col9a1Q05722 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.55□□□□□ -0.24
Col9a1Q05722 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.55□□□□□ -0.24
Col9a1Q05722 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.55□□□□□ -0.24
Col9a1Q05722 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 Gm8988-201ENSMUST00000155015 1240 ntBASIC13.55□□□□□ -0.24
Col9a1Q05722 Gm23757-201ENSMUST00000158353 100 ntBASIC13.55□□□□□ -0.24
Col9a1Q05722 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.55□□□□□ -0.24
Col9a1Q05722 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.55□□□□□ -0.24
Col9a1Q05722 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC13.55□□□□□ -0.24
Col9a1Q05722 Gm5621-201ENSMUST00000187303 640 ntBASIC13.55□□□□□ -0.24
Col9a1Q05722 Gm28324-201ENSMUST00000187913 264 ntBASIC13.55□□□□□ -0.24
Col9a1Q05722 Gm37638-201ENSMUST00000194337 1123 ntBASIC13.55□□□□□ -0.24
Col9a1Q05722 Gm8365-201ENSMUST00000197334 648 ntBASIC13.55□□□□□ -0.24
Col9a1Q05722 Gm45151-201ENSMUST00000205445 712 ntTSL 2 BASIC13.55□□□□□ -0.24
Col9a1Q05722 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.55□□□□□ -0.24
Col9a1Q05722 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.55□□□□□ -0.24
Col9a1Q05722 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Col9a1Q05722 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
Col9a1Q05722 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC13.55□□□□□ -0.24
Col9a1Q05722 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col9a1Q05722 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 Gm8325-201ENSMUST00000099086 453 ntBASIC13.55□□□□□ -0.24
Col9a1Q05722 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.55□□□□□ -0.24
Col9a1Q05722 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Col9a1Q05722 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Col9a1Q05722 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a1Q05722 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a1Q05722 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Col9a1Q05722 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a1Q05722 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a1Q05722 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms