Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.79□□□□□ -0.2
Col6a2Q02788 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.79□□□□□ -0.2
Col6a2Q02788 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.79□□□□□ -0.2
Col6a2Q02788 Gm43094-201ENSMUST00000196549 921 ntBASIC13.79□□□□□ -0.2
Col6a2Q02788 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.79□□□□□ -0.2
Col6a2Q02788 Gm18307-201ENSMUST00000206864 949 ntBASIC13.79□□□□□ -0.2
Col6a2Q02788 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.79□□□□□ -0.2
Col6a2Q02788 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.79□□□□□ -0.2
Col6a2Q02788 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.79□□□□□ -0.2
Col6a2Q02788 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Col6a2Q02788 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Col6a2Q02788 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.79□□□□□ -0.2
Col6a2Q02788 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col6a2Q02788 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Col6a2Q02788 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 Mir698-201ENSMUST00000102164 109 ntBASIC13.78□□□□□ -0.2
Col6a2Q02788 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
Col6a2Q02788 Gm11478-201ENSMUST00000117851 599 ntBASIC13.78□□□□□ -0.2
Col6a2Q02788 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.78□□□□□ -0.2
Col6a2Q02788 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Col6a2Q02788 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.78□□□□□ -0.2
Col6a2Q02788 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.78□□□□□ -0.2
Col6a2Q02788 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.78□□□□□ -0.2
Col6a2Q02788 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.78□□□□□ -0.2
Col6a2Q02788 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Col6a2Q02788 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Col6a2Q02788 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Col6a2Q02788 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.78□□□□□ -0.2
Col6a2Q02788 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.78□□□□□ -0.2
Col6a2Q02788 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.78□□□□□ -0.2
Col6a2Q02788 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a2Q02788 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Col6a2Q02788 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a2Q02788 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a2Q02788 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Col6a2Q02788 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a2Q02788 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a2Q02788 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a2Q02788 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a2Q02788 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a2Q02788 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a2Q02788 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a2Q02788 Gm15678-201ENSMUST00000117573 960 ntBASIC13.77□□□□□ -0.21
Col6a2Q02788 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.77□□□□□ -0.21
Col6a2Q02788 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.77□□□□□ -0.21
Col6a2Q02788 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a2Q02788 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Col6a2Q02788 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a2Q02788 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a2Q02788 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.77□□□□□ -0.21
Col6a2Q02788 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Col6a2Q02788 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.77□□□□□ -0.21
Col6a2Q02788 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.77□□□□□ -0.21
Col6a2Q02788 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Col6a2Q02788 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.77□□□□□ -0.21
Col6a2Q02788 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a2Q02788 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.77□□□□□ -0.21
Col6a2Q02788 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms