Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.06□□□□□ -0.16
Gabpb1Q00420 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabpb1Q00420 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gabpb1Q00420 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.05□□□□□ -0.16
Gabpb1Q00420 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.05□□□□□ -0.16
Gabpb1Q00420 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.05□□□□□ -0.16
Gabpb1Q00420 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gabpb1Q00420 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Gm13453-201ENSMUST00000118708 357 ntBASIC14.04□□□□□ -0.16
Gabpb1Q00420 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.04□□□□□ -0.16
Gabpb1Q00420 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Gm8927-201ENSMUST00000181978 981 ntBASIC14.04□□□□□ -0.16
Gabpb1Q00420 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Gabpb1Q00420 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.04□□□□□ -0.16
Gabpb1Q00420 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Gm3222-201ENSMUST00000071282 990 ntBASIC14.04□□□□□ -0.16
Gabpb1Q00420 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gabpb1Q00420 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Gabpb1Q00420 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.04□□□□□ -0.16
Gabpb1Q00420 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Gm13385-201ENSMUST00000121089 220 ntBASIC14.03□□□□□ -0.16
Gabpb1Q00420 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Gabpb1Q00420 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gabpb1Q00420 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms