Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Syt7-204ENSMUST00000223586 1344 ntBASIC15.02■□□□□ -0
Trim43cP86449 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43cP86449 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Trim43cP86449 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim43cP86449 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43cP86449 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trim43cP86449 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.02■□□□□ -0
Trim43cP86449 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
Trim43cP86449 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.02■□□□□ -0
Trim43cP86449 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.02■□□□□ -0
Trim43cP86449 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim43cP86449 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.02■□□□□ -0
Trim43cP86449 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.02■□□□□ -0
Trim43cP86449 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.02■□□□□ -0
Trim43cP86449 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trim43cP86449 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.02□□□□□ -0.01
Trim43cP86449 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43cP86449 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43cP86449 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trim43cP86449 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43cP86449 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43cP86449 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.02□□□□□ -0.01
Trim43cP86449 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.02□□□□□ -0.01
Trim43cP86449 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43cP86449 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43cP86449 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43cP86449 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43cP86449 Matn2-206ENSMUST00000228570 2798 ntBASIC15.02□□□□□ -0.01
Trim43cP86449 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trim43cP86449 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43cP86449 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43cP86449 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.01□□□□□ -0.01
Trim43cP86449 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trim43cP86449 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.01□□□□□ -0.01
Trim43cP86449 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43cP86449 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43cP86449 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.01□□□□□ -0.01
Trim43cP86449 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Trim43cP86449 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43cP86449 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim43cP86449 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trim43cP86449 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim43cP86449 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43cP86449 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC15.01□□□□□ -0.01
Trim43cP86449 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.01□□□□□ -0.01
Trim43cP86449 Gm44719-201ENSMUST00000206404 149 ntBASIC15.01□□□□□ -0.01
Trim43cP86449 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.01□□□□□ -0.01
Trim43cP86449 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43cP86449 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43cP86449 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43cP86449 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.01□□□□□ -0.01
Trim43cP86449 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43cP86449 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43cP86449 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trim43cP86449 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim43cP86449 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim43cP86449 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43cP86449 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43cP86449 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43cP86449 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.01□□□□□ -0.01
Trim43cP86449 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim43cP86449 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43cP86449 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.01□□□□□ -0.01
Trim43cP86449 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trim43cP86449 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15□□□□□ -0.01
Trim43cP86449 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15□□□□□ -0.01
Trim43cP86449 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15□□□□□ -0.01
Trim43cP86449 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trim43cP86449 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15□□□□□ -0.01
Trim43cP86449 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
Trim43cP86449 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trim43cP86449 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trim43cP86449 Gm5425-201ENSMUST00000214125 459 ntBASIC15□□□□□ -0.01
Trim43cP86449 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15□□□□□ -0.01
Trim43cP86449 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15□□□□□ -0.01
Trim43cP86449 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms