Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trim43bP86448 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43bP86448 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Trim43bP86448 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43bP86448 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43bP86448 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43bP86448 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43bP86448 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Trim43bP86448 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43bP86448 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43bP86448 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43bP86448 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43bP86448 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43bP86448 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43bP86448 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.26□□□□□ -0.13
Trim43bP86448 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.26□□□□□ -0.13
Trim43bP86448 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.26□□□□□ -0.13
Trim43bP86448 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Trim43bP86448 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.26□□□□□ -0.13
Trim43bP86448 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.26□□□□□ -0.13
Trim43bP86448 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Trim43bP86448 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trim43bP86448 Gm22175-201ENSMUST00000175007 78 ntBASIC14.26□□□□□ -0.13
Trim43bP86448 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.26□□□□□ -0.13
Trim43bP86448 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43bP86448 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trim43bP86448 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43bP86448 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43bP86448 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43bP86448 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Trim43bP86448 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43bP86448 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43bP86448 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trim43bP86448 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim43bP86448 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43bP86448 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43bP86448 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43bP86448 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43bP86448 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43bP86448 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim43bP86448 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43bP86448 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.25□□□□□ -0.13
Trim43bP86448 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.25□□□□□ -0.13
Trim43bP86448 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43bP86448 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43bP86448 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43bP86448 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43bP86448 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43bP86448 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim43bP86448 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43bP86448 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43bP86448 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim43bP86448 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.25□□□□□ -0.13
Trim43bP86448 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.25□□□□□ -0.13
Trim43bP86448 Gm37230-201ENSMUST00000194491 818 ntBASIC14.25□□□□□ -0.13
Trim43bP86448 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trim43bP86448 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim43bP86448 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.25□□□□□ -0.13
Trim43bP86448 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43bP86448 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43bP86448 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim43bP86448 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim43bP86448 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.25□□□□□ -0.13
Trim43bP86448 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43bP86448 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43bP86448 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim43bP86448 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43bP86448 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Trim43bP86448 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim43bP86448 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim43bP86448 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim43bP86448 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43bP86448 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43bP86448 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43bP86448 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43bP86448 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43bP86448 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43bP86448 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Trim43bP86448 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43bP86448 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim43bP86448 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43bP86448 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim43bP86448 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim43bP86448 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43bP86448 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43bP86448 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43bP86448 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43bP86448 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43bP86448 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trim43bP86448 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43bP86448 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43bP86448 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43bP86448 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43bP86448 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim43bP86448 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43bP86448 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43bP86448 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.24□□□□□ -0.13
Trim43bP86448 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.24□□□□□ -0.13
Trim43bP86448 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43bP86448 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms