Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Gm22189-201ENSMUST00000103822 86 ntBASIC12.32□□□□□ -0.44
H3f3aP84244 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.32□□□□□ -0.44
H3f3aP84244 Gm24420-201ENSMUST00000176676 59 ntBASIC12.32□□□□□ -0.44
H3f3aP84244 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.32□□□□□ -0.44
H3f3aP84244 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.32□□□□□ -0.44
H3f3aP84244 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.32□□□□□ -0.44
H3f3aP84244 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
H3f3aP84244 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H3f3aP84244 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
H3f3aP84244 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.31□□□□□ -0.44
H3f3aP84244 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.31□□□□□ -0.44
H3f3aP84244 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
H3f3aP84244 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
H3f3aP84244 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
H3f3aP84244 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
H3f3aP84244 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
H3f3aP84244 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H3f3aP84244 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
H3f3aP84244 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
H3f3aP84244 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.3□□□□□ -0.44
H3f3aP84244 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.3□□□□□ -0.44
H3f3aP84244 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
H3f3aP84244 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.3□□□□□ -0.44
H3f3aP84244 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.3□□□□□ -0.44
H3f3aP84244 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.3□□□□□ -0.44
H3f3aP84244 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.3□□□□□ -0.44
H3f3aP84244 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.3□□□□□ -0.44
H3f3aP84244 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
H3f3aP84244 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H3f3aP84244 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H3f3aP84244 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms