Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Crnkl1P63154 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Crnkl1P63154 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Crnkl1P63154 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Crnkl1P63154 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Crnkl1P63154 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Crnkl1P63154 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Crnkl1P63154 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Crnkl1P63154 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.7□□□□□ -0.22
Crnkl1P63154 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Crnkl1P63154 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Crnkl1P63154 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crnkl1P63154 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crnkl1P63154 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Crnkl1P63154 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Crnkl1P63154 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crnkl1P63154 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crnkl1P63154 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Crnkl1P63154 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crnkl1P63154 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.69□□□□□ -0.22
Crnkl1P63154 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Crnkl1P63154 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crnkl1P63154 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crnkl1P63154 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.69□□□□□ -0.22
Crnkl1P63154 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Crnkl1P63154 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.69□□□□□ -0.22
Crnkl1P63154 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.69□□□□□ -0.22
Crnkl1P63154 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.69□□□□□ -0.22
Crnkl1P63154 Gm5264-201ENSMUST00000190584 848 ntBASIC13.69□□□□□ -0.22
Crnkl1P63154 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.69□□□□□ -0.22
Crnkl1P63154 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.69□□□□□ -0.22
Crnkl1P63154 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.69□□□□□ -0.22
Crnkl1P63154 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crnkl1P63154 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crnkl1P63154 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crnkl1P63154 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crnkl1P63154 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crnkl1P63154 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crnkl1P63154 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crnkl1P63154 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crnkl1P63154 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Crnkl1P63154 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crnkl1P63154 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crnkl1P63154 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crnkl1P63154 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Crnkl1P63154 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Crnkl1P63154 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Crnkl1P63154 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
Crnkl1P63154 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Gm11779-201ENSMUST00000118541 368 ntBASIC13.68□□□□□ -0.22
Crnkl1P63154 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Crnkl1P63154 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Crnkl1P63154 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.68□□□□□ -0.22
Crnkl1P63154 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Gm18246-201ENSMUST00000221023 728 ntBASIC13.68□□□□□ -0.22
Crnkl1P63154 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Crnkl1P63154 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crnkl1P63154 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crnkl1P63154 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Crnkl1P63154 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Crnkl1P63154 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crnkl1P63154 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crnkl1P63154 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crnkl1P63154 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Crnkl1P63154 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Crnkl1P63154 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crnkl1P63154 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crnkl1P63154 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crnkl1P63154 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crnkl1P63154 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Crnkl1P63154 Gm13464-201ENSMUST00000119418 935 ntBASIC13.67□□□□□ -0.22
Crnkl1P63154 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.67□□□□□ -0.22
Crnkl1P63154 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms