Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm6P62313 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm6P62313 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Lsm6P62313 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm6P62313 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm6P62313 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm6P62313 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm6P62313 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm6P62313 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Lsm6P62313 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm6P62313 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm6P62313 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Lsm6P62313 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm6P62313 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Lsm6P62313 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm6P62313 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm6P62313 Gm27321-201ENSMUST00000185021 205 ntBASIC12.15□□□□□ -0.46
Lsm6P62313 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.15□□□□□ -0.46
Lsm6P62313 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm6P62313 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm6P62313 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm6P62313 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm6P62313 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm6P62313 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm6P62313 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm6P62313 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Lsm6P62313 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm6P62313 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm6P62313 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.15□□□□□ -0.46
Lsm6P62313 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm6P62313 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm6P62313 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm6P62313 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
Lsm6P62313 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Lsm6P62313 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.14□□□□□ -0.47
Lsm6P62313 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Lsm6P62313 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Lsm6P62313 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Lsm6P62313 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.14□□□□□ -0.47
Lsm6P62313 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.14□□□□□ -0.47
Lsm6P62313 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.14□□□□□ -0.47
Lsm6P62313 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Lsm6P62313 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Lsm6P62313 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Lsm6P62313 Gm13453-201ENSMUST00000118708 357 ntBASIC12.14□□□□□ -0.47
Lsm6P62313 Gm13616-201ENSMUST00000120600 222 ntBASIC12.14□□□□□ -0.47
Lsm6P62313 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Gm10766-202ENSMUST00000194123 606 ntBASIC12.14□□□□□ -0.47
Lsm6P62313 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.14□□□□□ -0.47
Lsm6P62313 Gm6888-201ENSMUST00000221983 706 ntBASIC12.14□□□□□ -0.47
Lsm6P62313 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.14□□□□□ -0.47
Lsm6P62313 Mir497b-201ENSMUST00000093601 125 ntBASIC12.14□□□□□ -0.47
Lsm6P62313 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
Lsm6P62313 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.14□□□□□ -0.47
Lsm6P62313 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Lsm6P62313 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.14□□□□□ -0.47
Lsm6P62313 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Lsm6P62313 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm6P62313 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Lsm6P62313 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm6P62313 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm6P62313 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.13□□□□□ -0.47
Lsm6P62313 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm6P62313 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Lsm6P62313 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm6P62313 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Lsm6P62313 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.13□□□□□ -0.47
Lsm6P62313 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm6P62313 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm6P62313 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm6P62313 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms