Protein–RNA interactions for Protein: P61358

Rpl27, 60S ribosomal protein L27, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl27P61358 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl27P61358 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl27P61358 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rpl27P61358 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Rpl27P61358 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl27P61358 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl27P61358 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.36□□□□□ -0.43
Rpl27P61358 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl27P61358 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl27P61358 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Rpl27P61358 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl27P61358 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.35□□□□□ -0.43
Rpl27P61358 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl27P61358 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl27P61358 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl27P61358 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl27P61358 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl27P61358 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl27P61358 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl27P61358 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl27P61358 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl27P61358 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.35□□□□□ -0.43
Rpl27P61358 Mir698-201ENSMUST00000102164 109 ntBASIC12.35□□□□□ -0.43
Rpl27P61358 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Rpl27P61358 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.35□□□□□ -0.43
Rpl27P61358 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.35□□□□□ -0.43
Rpl27P61358 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.35□□□□□ -0.43
Rpl27P61358 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl27P61358 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Rpl27P61358 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rpl27P61358 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.35□□□□□ -0.43
Rpl27P61358 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.35□□□□□ -0.43
Rpl27P61358 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.35□□□□□ -0.43
Rpl27P61358 Gm21470-201ENSMUST00000187680 696 ntBASIC12.35□□□□□ -0.43
Rpl27P61358 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl27P61358 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.35□□□□□ -0.43
Rpl27P61358 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.35□□□□□ -0.43
Rpl27P61358 Gm46209-201ENSMUST00000217912 553 ntBASIC12.35□□□□□ -0.43
Rpl27P61358 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.35□□□□□ -0.43
Rpl27P61358 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rpl27P61358 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rpl27P61358 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rpl27P61358 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl27P61358 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl27P61358 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl27P61358 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl27P61358 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rpl27P61358 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Rpl27P61358 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl27P61358 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl27P61358 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl27P61358 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl27P61358 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl27P61358 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl27P61358 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl27P61358 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rpl27P61358 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rpl27P61358 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl27P61358 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.34□□□□□ -0.43
Rpl27P61358 Matn2-206ENSMUST00000228570 2798 ntBASIC12.34□□□□□ -0.43
Rpl27P61358 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.34□□□□□ -0.43
Rpl27P61358 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl27P61358 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl27P61358 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Rpl27P61358 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.34□□□□□ -0.43
Rpl27P61358 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.34□□□□□ -0.43
Rpl27P61358 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.34□□□□□ -0.43
Rpl27P61358 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rpl27P61358 Mir497b-201ENSMUST00000093601 125 ntBASIC12.34□□□□□ -0.43
Rpl27P61358 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl27P61358 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl27P61358 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl27P61358 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.34□□□□□ -0.43
Rpl27P61358 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl27P61358 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl27P61358 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rpl27P61358 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rpl27P61358 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl27P61358 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl27P61358 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl27P61358 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl27P61358 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.34□□□□□ -0.43
Rpl27P61358 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl27P61358 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl27P61358 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl27P61358 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.43
Rpl27P61358 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rpl27P61358 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl27P61358 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl27P61358 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl27P61358 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl27P61358 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.33□□□□□ -0.44
Rpl27P61358 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rpl27P61358 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl27P61358 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl27P61358 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl27P61358 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl27P61358 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl27P61358 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl27P61358 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms