Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Rab4aP56371 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Rab4aP56371 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.89□□□□□ -0.67
Rab4aP56371 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.89□□□□□ -0.67
Rab4aP56371 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Gm13312-201ENSMUST00000119631 718 ntBASIC10.89□□□□□ -0.67
Rab4aP56371 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC10.89□□□□□ -0.67
Rab4aP56371 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC10.89□□□□□ -0.67
Rab4aP56371 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC10.89□□□□□ -0.67
Rab4aP56371 AC127349.1-201ENSMUST00000224590 266 ntBASIC10.89□□□□□ -0.67
Rab4aP56371 AC112142.1-201ENSMUST00000228796 918 ntBASIC10.89□□□□□ -0.67
Rab4aP56371 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.89□□□□□ -0.67
Rab4aP56371 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Rab4aP56371 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Rab4aP56371 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Rab4aP56371 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Rab4aP56371 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Rab4aP56371 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rab4aP56371 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.89□□□□□ -0.67
Rab4aP56371 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.89□□□□□ -0.67
Rab4aP56371 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Gm14451-201ENSMUST00000121581 1542 ntBASIC10.89□□□□□ -0.67
Rab4aP56371 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab4aP56371 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.88□□□□□ -0.67
Rab4aP56371 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Rab4aP56371 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.88□□□□□ -0.67
Rab4aP56371 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Gm8344-201ENSMUST00000119813 856 ntBASIC10.88□□□□□ -0.67
Rab4aP56371 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Rab4aP56371 Gm8318-201ENSMUST00000182954 872 ntBASIC10.88□□□□□ -0.67
Rab4aP56371 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 AL672049.1-201ENSMUST00000197943 91 ntBASIC10.88□□□□□ -0.67
Rab4aP56371 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC10.88□□□□□ -0.67
Rab4aP56371 Vti1a-206ENSMUST00000225529 1244 ntBASIC10.88□□□□□ -0.67
Rab4aP56371 AC155729.1-201ENSMUST00000227758 544 ntBASIC10.88□□□□□ -0.67
Rab4aP56371 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC10.88□□□□□ -0.67
Rab4aP56371 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab4aP56371 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms