Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.61□□□□□ -0.23
CtskP55097 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.61□□□□□ -0.23
CtskP55097 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.61□□□□□ -0.23
CtskP55097 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.61□□□□□ -0.23
CtskP55097 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.61□□□□□ -0.23
CtskP55097 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CtskP55097 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CtskP55097 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CtskP55097 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.61□□□□□ -0.23
CtskP55097 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CtskP55097 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CtskP55097 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CtskP55097 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CtskP55097 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CtskP55097 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CtskP55097 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CtskP55097 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CtskP55097 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.6□□□□□ -0.23
CtskP55097 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CtskP55097 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.6□□□□□ -0.23
CtskP55097 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CtskP55097 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.6□□□□□ -0.23
CtskP55097 Gm5354-201ENSMUST00000182417 973 ntBASIC13.6□□□□□ -0.23
CtskP55097 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CtskP55097 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.6□□□□□ -0.23
CtskP55097 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CtskP55097 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CtskP55097 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.6□□□□□ -0.23
CtskP55097 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.6□□□□□ -0.23
CtskP55097 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.6□□□□□ -0.23
CtskP55097 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CtskP55097 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CtskP55097 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CtskP55097 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CtskP55097 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CtskP55097 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CtskP55097 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CtskP55097 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.6□□□□□ -0.23
CtskP55097 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CtskP55097 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CtskP55097 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CtskP55097 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CtskP55097 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CtskP55097 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CtskP55097 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CtskP55097 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CtskP55097 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CtskP55097 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CtskP55097 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CtskP55097 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CtskP55097 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CtskP55097 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CtskP55097 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CtskP55097 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CtskP55097 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.59□□□□□ -0.23
CtskP55097 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CtskP55097 Gm15957-201ENSMUST00000118893 974 ntBASIC13.59□□□□□ -0.23
CtskP55097 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CtskP55097 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.59□□□□□ -0.23
CtskP55097 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.59□□□□□ -0.23
CtskP55097 Gm8602-201ENSMUST00000184045 607 ntBASIC13.59□□□□□ -0.23
CtskP55097 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CtskP55097 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CtskP55097 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
CtskP55097 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
CtskP55097 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CtskP55097 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.59□□□□□ -0.23
CtskP55097 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CtskP55097 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CtskP55097 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CtskP55097 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CtskP55097 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CtskP55097 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CtskP55097 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CtskP55097 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CtskP55097 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
CtskP55097 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CtskP55097 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.58□□□□□ -0.24
CtskP55097 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.58□□□□□ -0.24
CtskP55097 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CtskP55097 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms