Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.45□□□□□ -0.1
NcanP55066 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NcanP55066 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NcanP55066 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.45□□□□□ -0.1
NcanP55066 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NcanP55066 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
NcanP55066 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.45□□□□□ -0.1
NcanP55066 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NcanP55066 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NcanP55066 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.45□□□□□ -0.1
NcanP55066 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NcanP55066 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NcanP55066 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.45□□□□□ -0.1
NcanP55066 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NcanP55066 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
NcanP55066 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NcanP55066 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NcanP55066 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.45□□□□□ -0.1
NcanP55066 Gm38144-201ENSMUST00000192790 465 ntBASIC14.45□□□□□ -0.1
NcanP55066 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NcanP55066 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.45□□□□□ -0.1
NcanP55066 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NcanP55066 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NcanP55066 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NcanP55066 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.45□□□□□ -0.1
NcanP55066 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.45□□□□□ -0.1
NcanP55066 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NcanP55066 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.45□□□□□ -0.1
NcanP55066 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NcanP55066 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NcanP55066 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NcanP55066 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NcanP55066 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NcanP55066 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NcanP55066 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
NcanP55066 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NcanP55066 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NcanP55066 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NcanP55066 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NcanP55066 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NcanP55066 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NcanP55066 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NcanP55066 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.44□□□□□ -0.1
NcanP55066 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.44□□□□□ -0.1
NcanP55066 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NcanP55066 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
NcanP55066 Gm11222-201ENSMUST00000119005 738 ntBASIC14.44□□□□□ -0.1
NcanP55066 Gm11597-201ENSMUST00000121423 964 ntBASIC14.44□□□□□ -0.1
NcanP55066 Gm12363-201ENSMUST00000122250 668 ntBASIC14.44□□□□□ -0.1
NcanP55066 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.44□□□□□ -0.1
NcanP55066 Gm27023-201ENSMUST00000182372 285 ntBASIC14.44□□□□□ -0.1
NcanP55066 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.44□□□□□ -0.1
NcanP55066 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.44□□□□□ -0.1
NcanP55066 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.44□□□□□ -0.1
NcanP55066 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC14.44□□□□□ -0.1
NcanP55066 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.44□□□□□ -0.1
NcanP55066 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NcanP55066 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NcanP55066 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NcanP55066 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NcanP55066 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NcanP55066 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
NcanP55066 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NcanP55066 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NcanP55066 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NcanP55066 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NcanP55066 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NcanP55066 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.44□□□□□ -0.1
NcanP55066 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NcanP55066 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NcanP55066 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NcanP55066 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NcanP55066 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NcanP55066 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.43□□□□□ -0.1
NcanP55066 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NcanP55066 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NcanP55066 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NcanP55066 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NcanP55066 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NcanP55066 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NcanP55066 Efs-202ENSMUST00000227037 2540 ntBASIC14.43□□□□□ -0.1
NcanP55066 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NcanP55066 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NcanP55066 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NcanP55066 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NcanP55066 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.43□□□□□ -0.1
NcanP55066 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NcanP55066 Gm11340-201ENSMUST00000119226 412 ntBASIC14.43□□□□□ -0.1
NcanP55066 Gm9083-201ENSMUST00000120423 819 ntBASIC14.43□□□□□ -0.1
NcanP55066 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.43□□□□□ -0.1
NcanP55066 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.43□□□□□ -0.1
NcanP55066 Gm13316-201ENSMUST00000140537 691 ntBASIC14.43□□□□□ -0.1
NcanP55066 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NcanP55066 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NcanP55066 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NcanP55066 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC14.43□□□□□ -0.1
NcanP55066 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC14.43□□□□□ -0.1
NcanP55066 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.43□□□□□ -0.1
NcanP55066 Gm30285-201ENSMUST00000214614 422 ntBASIC14.43□□□□□ -0.1
NcanP55066 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms