Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nub1P54729 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nub1P54729 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Nub1P54729 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nub1P54729 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nub1P54729 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.89□□□□□ -0.03
Nub1P54729 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Nub1P54729 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Nub1P54729 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.89□□□□□ -0.03
Nub1P54729 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.89□□□□□ -0.03
Nub1P54729 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.89□□□□□ -0.03
Nub1P54729 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nub1P54729 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.89□□□□□ -0.03
Nub1P54729 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.89□□□□□ -0.03
Nub1P54729 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nub1P54729 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nub1P54729 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.89□□□□□ -0.03
Nub1P54729 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nub1P54729 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.89□□□□□ -0.03
Nub1P54729 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nub1P54729 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nub1P54729 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nub1P54729 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nub1P54729 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Nub1P54729 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nub1P54729 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nub1P54729 Gm40377-201ENSMUST00000204604 2015 ntBASIC14.88□□□□□ -0.03
Nub1P54729 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nub1P54729 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nub1P54729 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nub1P54729 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nub1P54729 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.88□□□□□ -0.03
Nub1P54729 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nub1P54729 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nub1P54729 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nub1P54729 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nub1P54729 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.88□□□□□ -0.03
Nub1P54729 Gm14719-201ENSMUST00000121891 340 ntBASIC14.88□□□□□ -0.03
Nub1P54729 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.88□□□□□ -0.03
Nub1P54729 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Nub1P54729 Gm25925-201ENSMUST00000158314 306 ntBASIC14.88□□□□□ -0.03
Nub1P54729 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.88□□□□□ -0.03
Nub1P54729 Gm29667-201ENSMUST00000190817 490 ntBASIC14.88□□□□□ -0.03
Nub1P54729 Gm10766-202ENSMUST00000194123 606 ntBASIC14.88□□□□□ -0.03
Nub1P54729 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Nub1P54729 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.88□□□□□ -0.03
Nub1P54729 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nub1P54729 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Nub1P54729 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Nub1P54729 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nub1P54729 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nub1P54729 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nub1P54729 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nub1P54729 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nub1P54729 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Nub1P54729 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Nub1P54729 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Nub1P54729 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.87□□□□□ -0.03
Nub1P54729 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Nub1P54729 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.87□□□□□ -0.03
Nub1P54729 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Gm27838-201ENSMUST00000184829 128 ntBASIC14.87□□□□□ -0.03
Nub1P54729 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.87□□□□□ -0.03
Nub1P54729 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.87□□□□□ -0.03
Nub1P54729 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.87□□□□□ -0.03
Nub1P54729 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.87□□□□□ -0.03
Nub1P54729 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.87□□□□□ -0.03
Nub1P54729 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Nub1P54729 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.87□□□□□ -0.03
Nub1P54729 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nub1P54729 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.86□□□□□ -0.03
Nub1P54729 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms