Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fdft1P53798 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fdft1P53798 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Fdft1P53798 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.85□□□□□ -0.19
Fdft1P53798 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Fdft1P53798 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fdft1P53798 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Fdft1P53798 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Fdft1P53798 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fdft1P53798 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Fdft1P53798 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.84□□□□□ -0.19
Fdft1P53798 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.84□□□□□ -0.19
Fdft1P53798 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Fdft1P53798 AA543401-201ENSMUST00000164248 1269 ntBASIC13.84□□□□□ -0.19
Fdft1P53798 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Fdft1P53798 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Fdft1P53798 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.84□□□□□ -0.19
Fdft1P53798 Gm44608-201ENSMUST00000206827 855 ntBASIC13.84□□□□□ -0.19
Fdft1P53798 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.84□□□□□ -0.19
Fdft1P53798 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.84□□□□□ -0.19
Fdft1P53798 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fdft1P53798 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fdft1P53798 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fdft1P53798 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fdft1P53798 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fdft1P53798 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fdft1P53798 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.84□□□□□ -0.19
Fdft1P53798 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fdft1P53798 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fdft1P53798 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Fdft1P53798 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fdft1P53798 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fdft1P53798 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Fdft1P53798 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fdft1P53798 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.84□□□□□ -0.19
Fdft1P53798 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Fdft1P53798 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Fdft1P53798 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Fdft1P53798 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Fdft1P53798 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
Fdft1P53798 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Fdft1P53798 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.83□□□□□ -0.2
Fdft1P53798 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 Gm14701-201ENSMUST00000117156 348 ntBASIC13.83□□□□□ -0.2
Fdft1P53798 Gm6415-201ENSMUST00000118488 348 ntBASIC13.83□□□□□ -0.2
Fdft1P53798 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.83□□□□□ -0.2
Fdft1P53798 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.83□□□□□ -0.2
Fdft1P53798 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.83□□□□□ -0.2
Fdft1P53798 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.83□□□□□ -0.2
Fdft1P53798 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 Gm8396-201ENSMUST00000057361 823 ntBASIC13.83□□□□□ -0.2
Fdft1P53798 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Fdft1P53798 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Fdft1P53798 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Fdft1P53798 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Fdft1P53798 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.83□□□□□ -0.2
Fdft1P53798 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.83□□□□□ -0.2
Fdft1P53798 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Fdft1P53798 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Fdft1P53798 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Fdft1P53798 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.82□□□□□ -0.2
Fdft1P53798 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Fdft1P53798 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Fdft1P53798 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms