Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox3P53784 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox3P53784 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox3P53784 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox3P53784 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.26□□□□□ -0.29
Sox3P53784 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox3P53784 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox3P53784 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox3P53784 Gm15198-201ENSMUST00000117283 177 ntBASIC13.26□□□□□ -0.29
Sox3P53784 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.26□□□□□ -0.29
Sox3P53784 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Sox3P53784 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.26□□□□□ -0.29
Sox3P53784 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox3P53784 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.26□□□□□ -0.29
Sox3P53784 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox3P53784 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox3P53784 Gm28911-201ENSMUST00000188837 117 ntBASIC13.26□□□□□ -0.29
Sox3P53784 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sox3P53784 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sox3P53784 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox3P53784 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox3P53784 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox3P53784 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox3P53784 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox3P53784 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox3P53784 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox3P53784 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox3P53784 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox3P53784 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox3P53784 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Sox3P53784 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox3P53784 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox3P53784 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox3P53784 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox3P53784 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox3P53784 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox3P53784 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox3P53784 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox3P53784 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Sox3P53784 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox3P53784 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Sox3P53784 Gm12390-201ENSMUST00000117897 397 ntBASIC13.25□□□□□ -0.29
Sox3P53784 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.25□□□□□ -0.29
Sox3P53784 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox3P53784 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Sox3P53784 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.25□□□□□ -0.29
Sox3P53784 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.25□□□□□ -0.29
Sox3P53784 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox3P53784 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox3P53784 Gm18827-201ENSMUST00000188341 790 ntBASIC13.25□□□□□ -0.29
Sox3P53784 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Sox3P53784 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.25□□□□□ -0.29
Sox3P53784 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.25□□□□□ -0.29
Sox3P53784 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox3P53784 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox3P53784 Gm10478-201ENSMUST00000084451 396 ntBASIC13.25□□□□□ -0.29
Sox3P53784 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox3P53784 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox3P53784 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox3P53784 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox3P53784 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox3P53784 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.25□□□□□ -0.29
Sox3P53784 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox3P53784 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox3P53784 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sox3P53784 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox3P53784 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox3P53784 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox3P53784 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox3P53784 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Sox3P53784 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox3P53784 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sox3P53784 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox3P53784 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox3P53784 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox3P53784 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sox3P53784 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox3P53784 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox3P53784 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox3P53784 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.24□□□□□ -0.29
Sox3P53784 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.24□□□□□ -0.29
Sox3P53784 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox3P53784 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.24□□□□□ -0.29
Sox3P53784 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.24□□□□□ -0.29
Sox3P53784 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox3P53784 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox3P53784 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.24□□□□□ -0.29
Sox3P53784 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox3P53784 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox3P53784 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox3P53784 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox3P53784 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox3P53784 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.24□□□□□ -0.29
Sox3P53784 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox3P53784 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox3P53784 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.24□□□□□ -0.29
Sox3P53784 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.24□□□□□ -0.29
Sox3P53784 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox3P53784 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox3P53784 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms