Protein–RNA interactions for Protein: P52483

Ube2e3, Ubiquitin-conjugating enzyme E2 E3, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2e3P52483 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ube2e3P52483 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ube2e3P52483 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ube2e3P52483 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ube2e3P52483 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ube2e3P52483 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ube2e3P52483 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ube2e3P52483 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ube2e3P52483 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ube2e3P52483 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ube2e3P52483 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Ube2e3P52483 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Ube2e3P52483 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ube2e3P52483 Mir6956-201ENSMUST00000183598 62 ntBASIC13.27□□□□□ -0.29
Ube2e3P52483 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.27□□□□□ -0.29
Ube2e3P52483 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ube2e3P52483 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ube2e3P52483 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ube2e3P52483 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ube2e3P52483 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ube2e3P52483 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ube2e3P52483 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ube2e3P52483 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ube2e3P52483 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ube2e3P52483 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ube2e3P52483 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ube2e3P52483 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ube2e3P52483 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
Ube2e3P52483 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ube2e3P52483 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Ube2e3P52483 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.27□□□□□ -0.29
Ube2e3P52483 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ube2e3P52483 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.27□□□□□ -0.29
Ube2e3P52483 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ube2e3P52483 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ube2e3P52483 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ube2e3P52483 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ube2e3P52483 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ube2e3P52483 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Ube2e3P52483 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ube2e3P52483 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ube2e3P52483 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ube2e3P52483 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.26□□□□□ -0.29
Ube2e3P52483 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ube2e3P52483 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ube2e3P52483 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ube2e3P52483 Gm15920-201ENSMUST00000118998 402 ntBASIC13.26□□□□□ -0.29
Ube2e3P52483 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ube2e3P52483 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.26□□□□□ -0.29
Ube2e3P52483 Gm24420-201ENSMUST00000176676 59 ntBASIC13.26□□□□□ -0.29
Ube2e3P52483 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ube2e3P52483 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ube2e3P52483 Gm38294-201ENSMUST00000192831 381 ntBASIC13.26□□□□□ -0.29
Ube2e3P52483 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ube2e3P52483 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ube2e3P52483 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.26□□□□□ -0.29
Ube2e3P52483 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.26□□□□□ -0.29
Ube2e3P52483 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ube2e3P52483 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ube2e3P52483 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ube2e3P52483 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Ube2e3P52483 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ube2e3P52483 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ube2e3P52483 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ube2e3P52483 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ube2e3P52483 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ube2e3P52483 Mir497b-201ENSMUST00000093601 125 ntBASIC13.26□□□□□ -0.29
Ube2e3P52483 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ube2e3P52483 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ube2e3P52483 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ube2e3P52483 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ube2e3P52483 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.25□□□□□ -0.29
Ube2e3P52483 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ube2e3P52483 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ube2e3P52483 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Ube2e3P52483 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ube2e3P52483 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ube2e3P52483 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.25□□□□□ -0.29
Ube2e3P52483 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ube2e3P52483 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ube2e3P52483 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ube2e3P52483 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ube2e3P52483 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ube2e3P52483 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.25□□□□□ -0.29
Ube2e3P52483 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ube2e3P52483 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ube2e3P52483 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ube2e3P52483 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ube2e3P52483 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ube2e3P52483 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ube2e3P52483 Gm6912-201ENSMUST00000117218 544 ntBASIC13.25□□□□□ -0.29
Ube2e3P52483 Gm13223-201ENSMUST00000118609 747 ntBASIC13.25□□□□□ -0.29
Ube2e3P52483 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.25□□□□□ -0.29
Ube2e3P52483 Gm13385-201ENSMUST00000121089 220 ntBASIC13.25□□□□□ -0.29
Ube2e3P52483 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.25□□□□□ -0.29
Ube2e3P52483 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ube2e3P52483 Gm8927-201ENSMUST00000181978 981 ntBASIC13.25□□□□□ -0.29
Ube2e3P52483 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Ube2e3P52483 Gm43703-201ENSMUST00000200523 763 ntBASIC13.25□□□□□ -0.29
Ube2e3P52483 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms