Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TubP50586 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TubP50586 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TubP50586 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TubP50586 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TubP50586 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TubP50586 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.18□□□□□ -0.14
TubP50586 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TubP50586 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.18□□□□□ -0.14
TubP50586 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.18□□□□□ -0.14
TubP50586 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TubP50586 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.18□□□□□ -0.14
TubP50586 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.18□□□□□ -0.14
TubP50586 Gm24420-201ENSMUST00000176676 59 ntBASIC14.18□□□□□ -0.14
TubP50586 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.18□□□□□ -0.14
TubP50586 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.18□□□□□ -0.14
TubP50586 Gm18905-201ENSMUST00000205454 928 ntBASIC14.18□□□□□ -0.14
TubP50586 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.18□□□□□ -0.14
TubP50586 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TubP50586 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.18□□□□□ -0.14
TubP50586 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.18□□□□□ -0.14
TubP50586 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.18□□□□□ -0.14
TubP50586 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TubP50586 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
TubP50586 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TubP50586 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TubP50586 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TubP50586 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TubP50586 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TubP50586 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TubP50586 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TubP50586 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TubP50586 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TubP50586 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TubP50586 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.18□□□□□ -0.14
TubP50586 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.18□□□□□ -0.14
TubP50586 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
TubP50586 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TubP50586 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TubP50586 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TubP50586 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TubP50586 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TubP50586 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TubP50586 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
TubP50586 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TubP50586 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.17□□□□□ -0.14
TubP50586 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.17□□□□□ -0.14
TubP50586 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TubP50586 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.17□□□□□ -0.14
TubP50586 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.17□□□□□ -0.14
TubP50586 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.17□□□□□ -0.14
TubP50586 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.17□□□□□ -0.14
TubP50586 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.17□□□□□ -0.14
TubP50586 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TubP50586 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.17□□□□□ -0.14
TubP50586 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TubP50586 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TubP50586 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TubP50586 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.16□□□□□ -0.14
TubP50586 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TubP50586 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TubP50586 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TubP50586 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
TubP50586 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TubP50586 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.16□□□□□ -0.14
TubP50586 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TubP50586 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TubP50586 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TubP50586 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TubP50586 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TubP50586 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
TubP50586 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TubP50586 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TubP50586 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms