Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prox1P48437 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prox1P48437 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prox1P48437 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prox1P48437 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prox1P48437 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Prox1P48437 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prox1P48437 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Prox1P48437 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prox1P48437 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.29□□□□□ -0.28
Prox1P48437 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prox1P48437 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Prox1P48437 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Prox1P48437 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Prox1P48437 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Prox1P48437 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Prox1P48437 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prox1P48437 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Prox1P48437 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prox1P48437 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.29□□□□□ -0.28
Prox1P48437 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.29□□□□□ -0.28
Prox1P48437 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prox1P48437 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prox1P48437 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prox1P48437 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prox1P48437 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prox1P48437 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prox1P48437 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Prox1P48437 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.29□□□□□ -0.28
Prox1P48437 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prox1P48437 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prox1P48437 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Prox1P48437 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Prox1P48437 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prox1P48437 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prox1P48437 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Prox1P48437 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prox1P48437 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prox1P48437 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Prox1P48437 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prox1P48437 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prox1P48437 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prox1P48437 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Prox1P48437 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Prox1P48437 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prox1P48437 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prox1P48437 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prox1P48437 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Prox1P48437 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prox1P48437 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prox1P48437 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Prox1P48437 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prox1P48437 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Prox1P48437 Gm11779-201ENSMUST00000118541 368 ntBASIC13.28□□□□□ -0.28
Prox1P48437 Gm11594-201ENSMUST00000122313 162 ntBASIC13.28□□□□□ -0.28
Prox1P48437 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.28□□□□□ -0.28
Prox1P48437 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Prox1P48437 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prox1P48437 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prox1P48437 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Prox1P48437 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prox1P48437 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prox1P48437 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Prox1P48437 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prox1P48437 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.28□□□□□ -0.28
Prox1P48437 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Prox1P48437 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prox1P48437 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Prox1P48437 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.28□□□□□ -0.28
Prox1P48437 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prox1P48437 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.28□□□□□ -0.28
Prox1P48437 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Prox1P48437 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prox1P48437 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Prox1P48437 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Prox1P48437 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prox1P48437 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Prox1P48437 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Prox1P48437 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prox1P48437 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prox1P48437 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prox1P48437 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prox1P48437 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Prox1P48437 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prox1P48437 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prox1P48437 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prox1P48437 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prox1P48437 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Prox1P48437 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Prox1P48437 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prox1P48437 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.27□□□□□ -0.29
Prox1P48437 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prox1P48437 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prox1P48437 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.27□□□□□ -0.29
Prox1P48437 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prox1P48437 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prox1P48437 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prox1P48437 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Prox1P48437 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Prox1P48437 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms