Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sox18P43680 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox18P43680 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox18P43680 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox18P43680 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox18P43680 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox18P43680 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox18P43680 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox18P43680 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Sox18P43680 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.28□□□□□ -0.28
Sox18P43680 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox18P43680 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Sox18P43680 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox18P43680 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Sox18P43680 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox18P43680 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.28□□□□□ -0.28
Sox18P43680 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox18P43680 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.28□□□□□ -0.28
Sox18P43680 Mir7070-201ENSMUST00000183657 86 ntBASIC13.28□□□□□ -0.28
Sox18P43680 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.28□□□□□ -0.28
Sox18P43680 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Sox18P43680 Gm9723-201ENSMUST00000192100 457 ntBASIC13.28□□□□□ -0.28
Sox18P43680 Gm43118-201ENSMUST00000199149 775 ntBASIC13.28□□□□□ -0.28
Sox18P43680 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox18P43680 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.28□□□□□ -0.28
Sox18P43680 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.28□□□□□ -0.28
Sox18P43680 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox18P43680 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Sox18P43680 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox18P43680 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Sox18P43680 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox18P43680 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox18P43680 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox18P43680 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox18P43680 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sox18P43680 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox18P43680 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox18P43680 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox18P43680 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox18P43680 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox18P43680 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox18P43680 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox18P43680 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox18P43680 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox18P43680 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox18P43680 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox18P43680 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Sox18P43680 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox18P43680 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox18P43680 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Sox18P43680 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Sox18P43680 Gm15376-201ENSMUST00000122258 783 ntBASIC13.27□□□□□ -0.29
Sox18P43680 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox18P43680 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Sox18P43680 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.27□□□□□ -0.29
Sox18P43680 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.27□□□□□ -0.29
Sox18P43680 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.27□□□□□ -0.29
Sox18P43680 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox18P43680 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox18P43680 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sox18P43680 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sox18P43680 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Sox18P43680 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sox18P43680 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.27□□□□□ -0.29
Sox18P43680 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sox18P43680 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox18P43680 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Sox18P43680 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox18P43680 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
Sox18P43680 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Sox18P43680 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sox18P43680 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox18P43680 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox18P43680 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox18P43680 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox18P43680 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox18P43680 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Sox18P43680 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox18P43680 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox18P43680 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sox18P43680 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.26□□□□□ -0.29
Sox18P43680 Gm15371-201ENSMUST00000117057 784 ntBASIC13.26□□□□□ -0.29
Sox18P43680 Gm13689-201ENSMUST00000119360 685 ntBASIC13.26□□□□□ -0.29
Sox18P43680 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Sox18P43680 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.26□□□□□ -0.29
Sox18P43680 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.26□□□□□ -0.29
Sox18P43680 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.26□□□□□ -0.29
Sox18P43680 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox18P43680 Gm26464-201ENSMUST00000157094 305 ntBASIC13.26□□□□□ -0.29
Sox18P43680 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
Sox18P43680 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.26□□□□□ -0.29
Sox18P43680 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox18P43680 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.26□□□□□ -0.29
Sox18P43680 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox18P43680 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.26□□□□□ -0.29
Sox18P43680 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox18P43680 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox18P43680 Gm21147-201ENSMUST00000186046 913 ntBASIC13.26□□□□□ -0.29
Sox18P43680 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.26□□□□□ -0.29
Sox18P43680 Gm42535-201ENSMUST00000197312 1399 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms