Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.68□□□□□ -0.38
Nkx2-2P42586 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-2P42586 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Gm21854-201ENSMUST00000179901 471 ntBASIC12.67□□□□□ -0.38
Nkx2-2P42586 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-2P42586 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-2P42586 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.67□□□□□ -0.38
Nkx2-2P42586 Gm20445-201ENSMUST00000061905 565 ntBASIC12.67□□□□□ -0.38
Nkx2-2P42586 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.67□□□□□ -0.38
Nkx2-2P42586 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-2P42586 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.66□□□□□ -0.38
Nkx2-2P42586 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Gm24694-201ENSMUST00000180054 110 ntBASIC12.66□□□□□ -0.38
Nkx2-2P42586 Gm27663-201ENSMUST00000184839 110 ntBASIC12.66□□□□□ -0.38
Nkx2-2P42586 Gm20949-201ENSMUST00000206478 952 ntBASIC12.66□□□□□ -0.38
Nkx2-2P42586 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx2-2P42586 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Nkx2-2P42586 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-2P42586 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms