Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TfamP40630 Gm5566-201ENSMUST00000116118 459 ntBASIC13.41□□□□□ -0.26
TfamP40630 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TfamP40630 Gm9719-201ENSMUST00000162765 543 ntBASIC13.41□□□□□ -0.26
TfamP40630 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.41□□□□□ -0.26
TfamP40630 Gm29541-201ENSMUST00000191351 678 ntBASIC13.41□□□□□ -0.26
TfamP40630 Gm43474-201ENSMUST00000196415 774 ntBASIC13.41□□□□□ -0.26
TfamP40630 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TfamP40630 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TfamP40630 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.41□□□□□ -0.26
TfamP40630 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TfamP40630 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TfamP40630 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TfamP40630 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TfamP40630 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TfamP40630 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.41□□□□□ -0.26
TfamP40630 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.41□□□□□ -0.26
TfamP40630 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TfamP40630 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.41□□□□□ -0.26
TfamP40630 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TfamP40630 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TfamP40630 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TfamP40630 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TfamP40630 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TfamP40630 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.4□□□□□ -0.26
TfamP40630 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TfamP40630 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
TfamP40630 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
TfamP40630 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TfamP40630 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TfamP40630 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TfamP40630 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.4□□□□□ -0.26
TfamP40630 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TfamP40630 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TfamP40630 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TfamP40630 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
TfamP40630 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TfamP40630 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.4□□□□□ -0.26
TfamP40630 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TfamP40630 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TfamP40630 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TfamP40630 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TfamP40630 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.4□□□□□ -0.26
TfamP40630 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.4□□□□□ -0.26
TfamP40630 Gm2445-201ENSMUST00000182798 989 ntBASIC13.4□□□□□ -0.26
TfamP40630 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TfamP40630 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.4□□□□□ -0.26
TfamP40630 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.4□□□□□ -0.26
TfamP40630 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TfamP40630 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TfamP40630 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
TfamP40630 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TfamP40630 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TfamP40630 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TfamP40630 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
TfamP40630 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TfamP40630 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TfamP40630 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TfamP40630 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TfamP40630 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TfamP40630 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TfamP40630 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.39□□□□□ -0.27
TfamP40630 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Gm18027-201ENSMUST00000218947 619 ntBASIC13.39□□□□□ -0.27
TfamP40630 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TfamP40630 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.39□□□□□ -0.27
TfamP40630 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
TfamP40630 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
TfamP40630 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TfamP40630 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
TfamP40630 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TfamP40630 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms