Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.8□□□□□ -0.36
Foxa1P35582 Syt7-204ENSMUST00000223586 1344 ntBASIC12.8□□□□□ -0.36
Foxa1P35582 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxa1P35582 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxa1P35582 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxa1P35582 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxa1P35582 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxa1P35582 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxa1P35582 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Foxa1P35582 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxa1P35582 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxa1P35582 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Foxa1P35582 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Foxa1P35582 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxa1P35582 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.79□□□□□ -0.36
Foxa1P35582 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.79□□□□□ -0.36
Foxa1P35582 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.79□□□□□ -0.36
Foxa1P35582 Gm24694-201ENSMUST00000180054 110 ntBASIC12.79□□□□□ -0.36
Foxa1P35582 Gm27663-201ENSMUST00000184839 110 ntBASIC12.79□□□□□ -0.36
Foxa1P35582 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.79□□□□□ -0.36
Foxa1P35582 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.79□□□□□ -0.36
Foxa1P35582 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxa1P35582 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.79□□□□□ -0.36
Foxa1P35582 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Foxa1P35582 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxa1P35582 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Foxa1P35582 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxa1P35582 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Foxa1P35582 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Foxa1P35582 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.79□□□□□ -0.36
Foxa1P35582 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxa1P35582 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxa1P35582 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Foxa1P35582 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxa1P35582 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Foxa1P35582 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxa1P35582 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxa1P35582 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Foxa1P35582 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.78□□□□□ -0.36
Foxa1P35582 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Foxa1P35582 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 Gm6912-201ENSMUST00000117218 544 ntBASIC12.78□□□□□ -0.36
Foxa1P35582 Gm15321-201ENSMUST00000121290 288 ntBASIC12.78□□□□□ -0.36
Foxa1P35582 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.78□□□□□ -0.36
Foxa1P35582 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.78□□□□□ -0.36
Foxa1P35582 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Foxa1P35582 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Foxa1P35582 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Foxa1P35582 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Foxa1P35582 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.78□□□□□ -0.36
Foxa1P35582 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Foxa1P35582 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Foxa1P35582 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Foxa1P35582 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Foxa1P35582 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Foxa1P35582 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Foxa1P35582 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Foxa1P35582 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Foxa1P35582 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Foxa1P35582 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Foxa1P35582 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Foxa1P35582 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Foxa1P35582 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Foxa1P35582 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Foxa1P35582 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Foxa1P35582 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Foxa1P35582 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.77□□□□□ -0.37
Foxa1P35582 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Foxa1P35582 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Foxa1P35582 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms