Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.81■□□□□ 0.12
Vcam1P29533 Mir6420-201ENSMUST00000185032 102 ntBASIC15.81■□□□□ 0.12
Vcam1P29533 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.81■□□□□ 0.12
Vcam1P29533 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Vcam1P29533 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.81■□□□□ 0.12
Vcam1P29533 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.81■□□□□ 0.12
Vcam1P29533 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
Vcam1P29533 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Vcam1P29533 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vcam1P29533 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
Vcam1P29533 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcam1P29533 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcam1P29533 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcam1P29533 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcam1P29533 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.8■□□□□ 0.12
Vcam1P29533 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcam1P29533 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcam1P29533 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Vcam1P29533 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcam1P29533 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.8■□□□□ 0.12
Vcam1P29533 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcam1P29533 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vcam1P29533 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Vcam1P29533 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcam1P29533 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vcam1P29533 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.8■□□□□ 0.12
Vcam1P29533 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.8■□□□□ 0.12
Vcam1P29533 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vcam1P29533 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.8■□□□□ 0.12
Vcam1P29533 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.8■□□□□ 0.12
Vcam1P29533 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcam1P29533 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.8■□□□□ 0.12
Vcam1P29533 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.8■□□□□ 0.12
Vcam1P29533 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcam1P29533 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Vcam1P29533 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcam1P29533 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Vcam1P29533 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Vcam1P29533 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcam1P29533 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcam1P29533 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcam1P29533 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcam1P29533 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcam1P29533 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcam1P29533 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcam1P29533 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vcam1P29533 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcam1P29533 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcam1P29533 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcam1P29533 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Vcam1P29533 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcam1P29533 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Vcam1P29533 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.79■□□□□ 0.12
Vcam1P29533 Gm5187-201ENSMUST00000117317 991 ntBASIC15.79■□□□□ 0.12
Vcam1P29533 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vcam1P29533 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.79■□□□□ 0.12
Vcam1P29533 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.79■□□□□ 0.12
Vcam1P29533 Gm4271-201ENSMUST00000174444 973 ntBASIC15.79■□□□□ 0.12
Vcam1P29533 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC15.79■□□□□ 0.12
Vcam1P29533 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.79■□□□□ 0.12
Vcam1P29533 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.79■□□□□ 0.12
Vcam1P29533 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vcam1P29533 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcam1P29533 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.79■□□□□ 0.12
Vcam1P29533 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Vcam1P29533 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Vcam1P29533 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcam1P29533 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcam1P29533 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vcam1P29533 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
Vcam1P29533 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcam1P29533 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Vcam1P29533 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Vcam1P29533 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcam1P29533 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.79■□□□□ 0.12
Vcam1P29533 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcam1P29533 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vcam1P29533 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcam1P29533 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Vcam1P29533 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vcam1P29533 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vcam1P29533 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vcam1P29533 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Vcam1P29533 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vcam1P29533 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms