Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.21□□□□□ -0.13
Nfkb1P25799 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.21□□□□□ -0.13
Nfkb1P25799 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.21□□□□□ -0.13
Nfkb1P25799 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nfkb1P25799 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.21□□□□□ -0.13
Nfkb1P25799 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nfkb1P25799 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nfkb1P25799 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nfkb1P25799 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nfkb1P25799 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nfkb1P25799 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nfkb1P25799 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nfkb1P25799 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nfkb1P25799 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nfkb1P25799 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nfkb1P25799 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nfkb1P25799 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.2□□□□□ -0.14
Nfkb1P25799 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nfkb1P25799 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.2□□□□□ -0.14
Nfkb1P25799 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nfkb1P25799 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nfkb1P25799 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nfkb1P25799 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nfkb1P25799 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nfkb1P25799 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Nfkb1P25799 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Nfkb1P25799 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nfkb1P25799 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nfkb1P25799 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nfkb1P25799 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nfkb1P25799 Gm11524-201ENSMUST00000119349 807 ntBASIC14.2□□□□□ -0.14
Nfkb1P25799 Gm15376-201ENSMUST00000122258 783 ntBASIC14.2□□□□□ -0.14
Nfkb1P25799 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.2□□□□□ -0.14
Nfkb1P25799 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nfkb1P25799 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.2□□□□□ -0.14
Nfkb1P25799 Gm43438-201ENSMUST00000198133 379 ntBASIC14.2□□□□□ -0.14
Nfkb1P25799 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.2□□□□□ -0.14
Nfkb1P25799 Gm5035-201ENSMUST00000215581 927 ntBASIC14.2□□□□□ -0.14
Nfkb1P25799 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.2□□□□□ -0.14
Nfkb1P25799 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nfkb1P25799 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nfkb1P25799 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nfkb1P25799 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.2□□□□□ -0.14
Nfkb1P25799 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nfkb1P25799 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nfkb1P25799 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nfkb1P25799 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.2□□□□□ -0.14
Nfkb1P25799 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nfkb1P25799 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.2□□□□□ -0.14
Nfkb1P25799 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Nfkb1P25799 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nfkb1P25799 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nfkb1P25799 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.2□□□□□ -0.14
Nfkb1P25799 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nfkb1P25799 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nfkb1P25799 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nfkb1P25799 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nfkb1P25799 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nfkb1P25799 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nfkb1P25799 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nfkb1P25799 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nfkb1P25799 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nfkb1P25799 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nfkb1P25799 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nfkb1P25799 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nfkb1P25799 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nfkb1P25799 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nfkb1P25799 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nfkb1P25799 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nfkb1P25799 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nfkb1P25799 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.19□□□□□ -0.14
Nfkb1P25799 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nfkb1P25799 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.19□□□□□ -0.14
Nfkb1P25799 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Nfkb1P25799 Gm8584-201ENSMUST00000171982 758 ntBASIC14.19□□□□□ -0.14
Nfkb1P25799 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.19□□□□□ -0.14
Nfkb1P25799 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.19□□□□□ -0.14
Nfkb1P25799 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nfkb1P25799 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nfkb1P25799 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nfkb1P25799 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nfkb1P25799 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nfkb1P25799 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nfkb1P25799 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nfkb1P25799 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nfkb1P25799 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.19□□□□□ -0.14
Nfkb1P25799 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nfkb1P25799 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nfkb1P25799 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.19□□□□□ -0.14
Nfkb1P25799 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nfkb1P25799 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nfkb1P25799 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.18□□□□□ -0.14
Nfkb1P25799 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms