Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
BdnfP21237 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BdnfP21237 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BdnfP21237 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BdnfP21237 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
BdnfP21237 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BdnfP21237 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
BdnfP21237 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
BdnfP21237 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BdnfP21237 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
BdnfP21237 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
BdnfP21237 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.28□□□□□ -0.28
BdnfP21237 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.28□□□□□ -0.28
BdnfP21237 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
BdnfP21237 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.28□□□□□ -0.28
BdnfP21237 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.28□□□□□ -0.28
BdnfP21237 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.28□□□□□ -0.28
BdnfP21237 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BdnfP21237 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
BdnfP21237 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.28□□□□□ -0.28
BdnfP21237 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
BdnfP21237 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.28□□□□□ -0.28
BdnfP21237 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
BdnfP21237 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
BdnfP21237 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.28□□□□□ -0.28
BdnfP21237 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.28□□□□□ -0.28
BdnfP21237 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
BdnfP21237 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
BdnfP21237 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
BdnfP21237 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
BdnfP21237 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
BdnfP21237 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
BdnfP21237 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.27□□□□□ -0.28
BdnfP21237 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
BdnfP21237 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.27□□□□□ -0.29
BdnfP21237 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
BdnfP21237 Gm2810-201ENSMUST00000118681 990 ntBASIC13.27□□□□□ -0.29
BdnfP21237 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.27□□□□□ -0.29
BdnfP21237 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
BdnfP21237 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
BdnfP21237 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.27□□□□□ -0.29
BdnfP21237 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
BdnfP21237 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
BdnfP21237 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
BdnfP21237 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
BdnfP21237 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
BdnfP21237 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
BdnfP21237 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
BdnfP21237 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
BdnfP21237 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
BdnfP21237 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.27□□□□□ -0.29
BdnfP21237 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
BdnfP21237 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
BdnfP21237 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
BdnfP21237 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
BdnfP21237 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
BdnfP21237 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
BdnfP21237 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
BdnfP21237 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BdnfP21237 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
BdnfP21237 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
BdnfP21237 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
BdnfP21237 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
BdnfP21237 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
BdnfP21237 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
BdnfP21237 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BdnfP21237 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.26□□□□□ -0.29
BdnfP21237 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
BdnfP21237 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
BdnfP21237 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
BdnfP21237 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.26□□□□□ -0.29
BdnfP21237 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.26□□□□□ -0.29
BdnfP21237 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.26□□□□□ -0.29
BdnfP21237 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
BdnfP21237 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BdnfP21237 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BdnfP21237 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BdnfP21237 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BdnfP21237 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BdnfP21237 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
BdnfP21237 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.26□□□□□ -0.29
BdnfP21237 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BdnfP21237 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.26□□□□□ -0.29
BdnfP21237 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
BdnfP21237 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
BdnfP21237 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BdnfP21237 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BdnfP21237 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
BdnfP21237 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
BdnfP21237 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
BdnfP21237 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
BdnfP21237 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BdnfP21237 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BdnfP21237 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
BdnfP21237 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.25□□□□□ -0.29
BdnfP21237 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.25□□□□□ -0.29
BdnfP21237 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BdnfP21237 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.25□□□□□ -0.29
BdnfP21237 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
BdnfP21237 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms