Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VimP20152 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
VimP20152 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
VimP20152 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VimP20152 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VimP20152 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.01□□□□□ -0.17
VimP20152 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
VimP20152 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.01□□□□□ -0.17
VimP20152 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.01□□□□□ -0.17
VimP20152 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VimP20152 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.01□□□□□ -0.17
VimP20152 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.01□□□□□ -0.17
VimP20152 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.01□□□□□ -0.17
VimP20152 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
VimP20152 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
VimP20152 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VimP20152 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VimP20152 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VimP20152 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VimP20152 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14□□□□□ -0.17
VimP20152 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14□□□□□ -0.17
VimP20152 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14□□□□□ -0.17
VimP20152 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14□□□□□ -0.17
VimP20152 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14□□□□□ -0.17
VimP20152 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VimP20152 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VimP20152 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14□□□□□ -0.17
VimP20152 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
VimP20152 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VimP20152 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
VimP20152 Gm5939-201ENSMUST00000119613 2874 ntBASIC14□□□□□ -0.17
VimP20152 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VimP20152 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14□□□□□ -0.17
VimP20152 Gm12644-201ENSMUST00000119935 606 ntBASIC14□□□□□ -0.17
VimP20152 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
VimP20152 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14□□□□□ -0.17
VimP20152 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
VimP20152 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14□□□□□ -0.17
VimP20152 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VimP20152 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14□□□□□ -0.17
VimP20152 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14□□□□□ -0.17
VimP20152 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
VimP20152 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14□□□□□ -0.17
VimP20152 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VimP20152 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14□□□□□ -0.17
VimP20152 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
VimP20152 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VimP20152 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
VimP20152 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VimP20152 Gm20554-201ENSMUST00000177421 2352 ntBASIC14□□□□□ -0.17
VimP20152 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VimP20152 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VimP20152 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VimP20152 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VimP20152 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VimP20152 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VimP20152 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VimP20152 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.99□□□□□ -0.17
VimP20152 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VimP20152 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
VimP20152 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VimP20152 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VimP20152 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VimP20152 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.99□□□□□ -0.17
VimP20152 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.99□□□□□ -0.17
VimP20152 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.99□□□□□ -0.17
VimP20152 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VimP20152 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
VimP20152 Gm4535-201ENSMUST00000182274 558 ntBASIC13.99□□□□□ -0.17
VimP20152 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.99□□□□□ -0.17
VimP20152 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VimP20152 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms