Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cntn1P12960 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Cntn1P12960 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cntn1P12960 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cntn1P12960 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Cntn1P12960 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cntn1P12960 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cntn1P12960 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Cntn1P12960 Gm12138-201ENSMUST00000122180 951 ntBASIC13.27□□□□□ -0.29
Cntn1P12960 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cntn1P12960 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.27□□□□□ -0.29
Cntn1P12960 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cntn1P12960 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.27□□□□□ -0.29
Cntn1P12960 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cntn1P12960 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cntn1P12960 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.27□□□□□ -0.29
Cntn1P12960 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cntn1P12960 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cntn1P12960 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cntn1P12960 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cntn1P12960 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cntn1P12960 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cntn1P12960 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cntn1P12960 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cntn1P12960 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cntn1P12960 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cntn1P12960 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cntn1P12960 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cntn1P12960 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cntn1P12960 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cntn1P12960 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cntn1P12960 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cntn1P12960 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cntn1P12960 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.26□□□□□ -0.29
Cntn1P12960 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cntn1P12960 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cntn1P12960 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cntn1P12960 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cntn1P12960 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cntn1P12960 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cntn1P12960 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Cntn1P12960 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Cntn1P12960 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Cntn1P12960 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cntn1P12960 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cntn1P12960 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cntn1P12960 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cntn1P12960 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cntn1P12960 Gm12341-201ENSMUST00000119724 503 ntBASIC13.26□□□□□ -0.29
Cntn1P12960 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cntn1P12960 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cntn1P12960 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cntn1P12960 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cntn1P12960 Gm29741-201ENSMUST00000192667 421 ntBASIC13.26□□□□□ -0.29
Cntn1P12960 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cntn1P12960 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.26□□□□□ -0.29
Cntn1P12960 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cntn1P12960 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cntn1P12960 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cntn1P12960 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cntn1P12960 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cntn1P12960 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cntn1P12960 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cntn1P12960 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cntn1P12960 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.26□□□□□ -0.29
Cntn1P12960 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cntn1P12960 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cntn1P12960 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cntn1P12960 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cntn1P12960 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cntn1P12960 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cntn1P12960 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cntn1P12960 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cntn1P12960 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cntn1P12960 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cntn1P12960 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.25□□□□□ -0.29
Cntn1P12960 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.25□□□□□ -0.29
Cntn1P12960 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.25□□□□□ -0.29
Cntn1P12960 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.25□□□□□ -0.29
Cntn1P12960 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cntn1P12960 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Cntn1P12960 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cntn1P12960 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cntn1P12960 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cntn1P12960 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
Cntn1P12960 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cntn1P12960 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cntn1P12960 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cntn1P12960 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.24□□□□□ -0.29
Cntn1P12960 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cntn1P12960 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cntn1P12960 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cntn1P12960 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.24□□□□□ -0.29
Cntn1P12960 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cntn1P12960 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Cntn1P12960 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cntn1P12960 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cntn1P12960 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cntn1P12960 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cntn1P12960 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms