Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 AC166574.4-201ENSMUST00000227165 1937 ntBASIC9.47□□□□□ -0.89
Smim1P0C8K7 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Gm43051-201ENSMUST00000201096 2678 ntBASIC9.47□□□□□ -0.89
Smim1P0C8K7 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Gm6623-201ENSMUST00000173570 544 ntBASIC9.47□□□□□ -0.89
Smim1P0C8K7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smim1P0C8K7 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smim1P0C8K7 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smim1P0C8K7 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smim1P0C8K7 CT025678.1-201ENSMUST00000214795 2972 ntBASIC9.46□□□□□ -0.89
Smim1P0C8K7 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smim1P0C8K7 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC9.46□□□□□ -0.89
Smim1P0C8K7 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.89
Smim1P0C8K7 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smim1P0C8K7 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC9.46□□□□□ -0.89
Smim1P0C8K7 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
Smim1P0C8K7 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Smim1P0C8K7 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smim1P0C8K7 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smim1P0C8K7 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smim1P0C8K7 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smim1P0C8K7 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smim1P0C8K7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Smim1P0C8K7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Smim1P0C8K7 Gm18489-201ENSMUST00000172565 551 ntBASIC9.46□□□□□ -0.9
Smim1P0C8K7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC9.46□□□□□ -0.9
Smim1P0C8K7 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Smim1P0C8K7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC9.46□□□□□ -0.9
Smim1P0C8K7 Gm18636-201ENSMUST00000218846 1066 ntBASIC9.46□□□□□ -0.9
Smim1P0C8K7 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC9.46□□□□□ -0.9
Smim1P0C8K7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC9.46□□□□□ -0.9
Smim1P0C8K7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smim1P0C8K7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smim1P0C8K7 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smim1P0C8K7 Gm5417-201ENSMUST00000079706 384 ntBASIC9.46□□□□□ -0.9
Smim1P0C8K7 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Smim1P0C8K7 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC9.46□□□□□ -0.9
Smim1P0C8K7 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smim1P0C8K7 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smim1P0C8K7 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smim1P0C8K7 Gm28323-201ENSMUST00000186817 2499 ntBASIC9.46□□□□□ -0.9
Smim1P0C8K7 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Smim1P0C8K7 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smim1P0C8K7 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smim1P0C8K7 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smim1P0C8K7 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Smim1P0C8K7 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Smim1P0C8K7 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Smim1P0C8K7 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Smim1P0C8K7 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms