Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc9P09633 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc9P09633 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc9P09633 Gm11618-201ENSMUST00000117946 267 ntBASIC17.8■□□□□ 0.44
Hoxc9P09633 Gm12134-201ENSMUST00000122109 520 ntBASIC17.8■□□□□ 0.44
Hoxc9P09633 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC17.8■□□□□ 0.44
Hoxc9P09633 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc9P09633 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC17.8■□□□□ 0.44
Hoxc9P09633 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc9P09633 Gm10146-201ENSMUST00000072739 309 ntBASIC17.8■□□□□ 0.44
Hoxc9P09633 Gm17383-201ENSMUST00000078739 1041 ntBASIC17.8■□□□□ 0.44
Hoxc9P09633 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc9P09633 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.8■□□□□ 0.44
Hoxc9P09633 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc9P09633 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.8■□□□□ 0.44
Hoxc9P09633 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc9P09633 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxc9P09633 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
Hoxc9P09633 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC17.79■□□□□ 0.44
Hoxc9P09633 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc9P09633 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc9P09633 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
Hoxc9P09633 Gm45684-201ENSMUST00000210244 1571 ntBASIC17.79■□□□□ 0.44
Hoxc9P09633 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc9P09633 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc9P09633 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc9P09633 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc9P09633 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc9P09633 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc9P09633 Mir686-201ENSMUST00000102174 109 ntBASIC17.79■□□□□ 0.44
Hoxc9P09633 Gm13123-201ENSMUST00000122173 492 ntBASIC17.79■□□□□ 0.44
Hoxc9P09633 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc9P09633 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC17.79■□□□□ 0.44
Hoxc9P09633 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
Hoxc9P09633 Gm27501-201ENSMUST00000183599 107 ntBASIC17.79■□□□□ 0.44
Hoxc9P09633 Gm27516-201ENSMUST00000184237 98 ntBASIC17.79■□□□□ 0.44
Hoxc9P09633 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC17.79■□□□□ 0.44
Hoxc9P09633 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Hoxc9P09633 Gm3695-201ENSMUST00000087222 1009 ntBASIC17.79■□□□□ 0.44
Hoxc9P09633 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc9P09633 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc9P09633 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc9P09633 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc9P09633 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc9P09633 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc9P09633 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc9P09633 Abhd6-203ENSMUST00000225234 1958 ntBASIC17.79■□□□□ 0.44
Hoxc9P09633 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxc9P09633 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc9P09633 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc9P09633 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc9P09633 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc9P09633 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Hoxc9P09633 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Hoxc9P09633 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc9P09633 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc9P09633 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc9P09633 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC17.78■□□□□ 0.44
Hoxc9P09633 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc9P09633 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Hoxc9P09633 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC17.78■□□□□ 0.44
Hoxc9P09633 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc9P09633 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Hoxc9P09633 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc9P09633 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc9P09633 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC17.78■□□□□ 0.44
Hoxc9P09633 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc9P09633 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxc9P09633 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Hoxc9P09633 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Hoxc9P09633 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc9P09633 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc9P09633 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc9P09633 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Hoxc9P09633 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc9P09633 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc9P09633 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Hoxc9P09633 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc9P09633 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc9P09633 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Hoxc9P09633 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc9P09633 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc9P09633 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC17.77■□□□□ 0.44
Hoxc9P09633 Gm25261-201ENSMUST00000157416 134 ntBASIC17.77■□□□□ 0.44
Hoxc9P09633 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc9P09633 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc9P09633 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC17.77■□□□□ 0.44
Hoxc9P09633 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc9P09633 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC17.77■□□□□ 0.44
Hoxc9P09633 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc9P09633 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc9P09633 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxc9P09633 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.77■□□□□ 0.44
Hoxc9P09633 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hoxc9P09633 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Hoxc9P09633 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hoxc9P09633 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hoxc9P09633 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Hoxc9P09633 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hoxc9P09633 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms