Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
P04224 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
P04224 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.15□□□□□ -0.47
P04224 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.15□□□□□ -0.47
P04224 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.47
P04224 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
P04224 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P04224 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P04224 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P04224 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P04224 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.14□□□□□ -0.47
P04224 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P04224 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P04224 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P04224 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.14□□□□□ -0.47
P04224 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
P04224 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P04224 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.14□□□□□ -0.47
P04224 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P04224 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P04224 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
P04224 Gm8749-201ENSMUST00000117737 331 ntBASIC12.14□□□□□ -0.47
P04224 Gm14042-201ENSMUST00000120139 833 ntBASIC12.14□□□□□ -0.47
P04224 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
P04224 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P04224 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P04224 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P04224 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
P04224 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P04224 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P04224 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.14□□□□□ -0.47
P04224 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
P04224 Pck2-205ENSMUST00000226352 2784 ntBASIC12.14□□□□□ -0.47
P04224 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
P04224 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.14□□□□□ -0.47
P04224 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
P04224 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
P04224 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
P04224 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P04224 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P04224 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
P04224 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
P04224 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
P04224 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.14□□□□□ -0.47
P04224 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
P04224 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P04224 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.13□□□□□ -0.47
P04224 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
P04224 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Gm7153-201ENSMUST00000117092 455 ntBASIC12.13□□□□□ -0.47
P04224 Gm7862-201ENSMUST00000121461 292 ntBASIC12.13□□□□□ -0.47
P04224 Gm11452-201ENSMUST00000122376 690 ntBASIC12.13□□□□□ -0.47
P04224 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.13□□□□□ -0.47
P04224 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.13□□□□□ -0.47
P04224 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.13□□□□□ -0.47
P04224 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
P04224 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 AV026068-213ENSMUST00000223675 1171 ntBASIC12.13□□□□□ -0.47
P04224 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.13□□□□□ -0.47
P04224 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
P04224 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.13□□□□□ -0.47
P04224 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04224 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P04224 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P04224 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
P04224 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P04224 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P04224 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
P04224 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms