Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.28□□□□□ -0.28
P04213 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
P04213 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
P04213 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
P04213 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
P04213 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
P04213 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
P04213 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.27□□□□□ -0.29
P04213 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.27□□□□□ -0.29
P04213 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.27□□□□□ -0.29
P04213 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04213 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
P04213 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
P04213 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.27□□□□□ -0.29
P04213 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04213 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04213 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
P04213 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.27□□□□□ -0.29
P04213 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04213 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
P04213 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.27□□□□□ -0.29
P04213 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
P04213 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04213 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04213 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04213 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
P04213 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04213 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04213 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04213 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.27□□□□□ -0.29
P04213 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04213 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
P04213 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
P04213 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.26□□□□□ -0.29
P04213 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.26□□□□□ -0.29
P04213 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
P04213 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
P04213 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Gm15653-201ENSMUST00000119247 907 ntBASIC13.26□□□□□ -0.29
P04213 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.26□□□□□ -0.29
P04213 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Gm21470-201ENSMUST00000187680 696 ntBASIC13.26□□□□□ -0.29
P04213 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.26□□□□□ -0.29
P04213 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.26□□□□□ -0.29
P04213 Gm43703-201ENSMUST00000200523 763 ntBASIC13.26□□□□□ -0.29
P04213 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.26□□□□□ -0.29
P04213 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.26□□□□□ -0.29
P04213 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
P04213 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
P04213 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
P04213 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
P04213 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04213 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04213 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
P04213 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04213 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04213 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04213 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
P04213 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04213 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04213 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04213 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04213 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
P04213 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04213 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04213 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04213 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04213 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms