Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vti1bO88384 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vti1bO88384 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Vti1bO88384 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.21□□□□□ -0.29
Vti1bO88384 Gm8396-201ENSMUST00000057361 823 ntBASIC13.21□□□□□ -0.29
Vti1bO88384 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vti1bO88384 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vti1bO88384 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Vti1bO88384 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vti1bO88384 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vti1bO88384 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.3
Vti1bO88384 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vti1bO88384 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vti1bO88384 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Vti1bO88384 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vti1bO88384 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vti1bO88384 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vti1bO88384 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Vti1bO88384 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Vti1bO88384 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Gm22065-201ENSMUST00000103753 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm22066-201ENSMUST00000103761 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm24932-201ENSMUST00000103763 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm24115-201ENSMUST00000103799 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm22190-201ENSMUST00000103827 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm22191-201ENSMUST00000103831 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm24721-201ENSMUST00000103849 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm28018-201ENSMUST00000103869 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm26399-201ENSMUST00000103937 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.2□□□□□ -0.3
Vti1bO88384 Gm25349-201ENSMUST00000177728 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm23616-201ENSMUST00000177797 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm25871-201ENSMUST00000177816 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm24752-201ENSMUST00000178240 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm24496-201ENSMUST00000178287 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm25649-201ENSMUST00000178476 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm25548-201ENSMUST00000178681 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm23147-201ENSMUST00000178841 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm26095-201ENSMUST00000179270 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm22171-201ENSMUST00000179283 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm23936-201ENSMUST00000179354 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm22619-201ENSMUST00000179516 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm25255-201ENSMUST00000179579 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm24755-201ENSMUST00000179691 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm26506-201ENSMUST00000179692 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm25086-201ENSMUST00000179931 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm23243-201ENSMUST00000180047 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm24659-201ENSMUST00000180212 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm24169-201ENSMUST00000180244 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm23689-201ENSMUST00000180354 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.2□□□□□ -0.3
Vti1bO88384 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm27359-201ENSMUST00000184153 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm27785-201ENSMUST00000184268 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm27466-201ENSMUST00000184396 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Gm27703-201ENSMUST00000184836 110 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.2□□□□□ -0.3
Vti1bO88384 Gm5312-201ENSMUST00000203728 547 ntBASIC13.2□□□□□ -0.3
Vti1bO88384 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Vti1bO88384 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1bO88384 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.19□□□□□ -0.3
Vti1bO88384 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1bO88384 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1bO88384 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1bO88384 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1bO88384 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1bO88384 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Vti1bO88384 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1bO88384 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1bO88384 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1bO88384 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1bO88384 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms