Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.29□□□□□ -0.44
Col5a1O88207 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.29□□□□□ -0.44
Col5a1O88207 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Col5a1O88207 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Col5a1O88207 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.29□□□□□ -0.44
Col5a1O88207 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.29□□□□□ -0.44
Col5a1O88207 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.29□□□□□ -0.44
Col5a1O88207 Gm25927-201ENSMUST00000175058 117 ntBASIC12.29□□□□□ -0.44
Col5a1O88207 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Col5a1O88207 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Col5a1O88207 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.28□□□□□ -0.44
Col5a1O88207 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.28□□□□□ -0.44
Col5a1O88207 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Col5a1O88207 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.28□□□□□ -0.44
Col5a1O88207 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.28□□□□□ -0.44
Col5a1O88207 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Gm45186-201ENSMUST00000206874 478 ntBASIC12.28□□□□□ -0.44
Col5a1O88207 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.28□□□□□ -0.44
Col5a1O88207 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.28□□□□□ -0.44
Col5a1O88207 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Col5a1O88207 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.28□□□□□ -0.44
Col5a1O88207 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC12.28□□□□□ -0.44
Col5a1O88207 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
Col5a1O88207 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col5a1O88207 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
Col5a1O88207 Gm15370-201ENSMUST00000117158 253 ntBASIC12.27□□□□□ -0.44
Col5a1O88207 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.27□□□□□ -0.44
Col5a1O88207 Gm24990-201ENSMUST00000157406 323 ntBASIC12.27□□□□□ -0.44
Col5a1O88207 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Col5a1O88207 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.27□□□□□ -0.44
Col5a1O88207 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.27□□□□□ -0.44
Col5a1O88207 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.27□□□□□ -0.44
Col5a1O88207 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col5a1O88207 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Col5a1O88207 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.27□□□□□ -0.44
Col5a1O88207 Gm26315-201ENSMUST00000083890 321 ntBASIC12.27□□□□□ -0.44
Col5a1O88207 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Col5a1O88207 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Col5a1O88207 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Col5a1O88207 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col5a1O88207 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col5a1O88207 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col5a1O88207 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col5a1O88207 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col5a1O88207 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col5a1O88207 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col5a1O88207 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col5a1O88207 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col5a1O88207 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col5a1O88207 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col5a1O88207 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Col5a1O88207 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col5a1O88207 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
Col5a1O88207 Gm8805-201ENSMUST00000117848 313 ntBASIC12.27□□□□□ -0.45
Col5a1O88207 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col5a1O88207 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.27□□□□□ -0.45
Col5a1O88207 Gm8099-201ENSMUST00000200510 742 ntBASIC12.27□□□□□ -0.45
Col5a1O88207 Gm8227-201ENSMUST00000223306 571 ntBASIC12.27□□□□□ -0.45
Col5a1O88207 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col5a1O88207 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col5a1O88207 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.27□□□□□ -0.45
Col5a1O88207 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col5a1O88207 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col5a1O88207 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms