Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim1O70400 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim1O70400 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim1O70400 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim1O70400 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim1O70400 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim1O70400 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim1O70400 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim1O70400 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim1O70400 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim1O70400 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.66□□□□□ -0.22
Pdlim1O70400 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.66□□□□□ -0.22
Pdlim1O70400 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Pdlim1O70400 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.66□□□□□ -0.22
Pdlim1O70400 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.66□□□□□ -0.22
Pdlim1O70400 Gm5279-201ENSMUST00000199575 745 ntBASIC13.66□□□□□ -0.22
Pdlim1O70400 Gm44855-201ENSMUST00000205725 362 ntBASIC13.66□□□□□ -0.22
Pdlim1O70400 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.66□□□□□ -0.22
Pdlim1O70400 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Pdlim1O70400 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pdlim1O70400 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pdlim1O70400 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pdlim1O70400 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.66□□□□□ -0.22
Pdlim1O70400 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim1O70400 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.66□□□□□ -0.22
Pdlim1O70400 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim1O70400 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim1O70400 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim1O70400 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pdlim1O70400 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim1O70400 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim1O70400 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim1O70400 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Pdlim1O70400 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim1O70400 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Pdlim1O70400 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.65□□□□□ -0.22
Pdlim1O70400 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim1O70400 Gm7488-201ENSMUST00000117148 684 ntBASIC13.65□□□□□ -0.22
Pdlim1O70400 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.65□□□□□ -0.22
Pdlim1O70400 Gm42612-201ENSMUST00000197986 623 ntBASIC13.65□□□□□ -0.22
Pdlim1O70400 Gm43170-201ENSMUST00000199827 612 ntBASIC13.65□□□□□ -0.22
Pdlim1O70400 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pdlim1O70400 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim1O70400 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim1O70400 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim1O70400 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pdlim1O70400 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim1O70400 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.65□□□□□ -0.22
Pdlim1O70400 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim1O70400 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Pdlim1O70400 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim1O70400 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim1O70400 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim1O70400 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim1O70400 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim1O70400 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.65□□□□□ -0.22
Pdlim1O70400 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim1O70400 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Pdlim1O70400 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Pdlim1O70400 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.64□□□□□ -0.23
Pdlim1O70400 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim1O70400 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim1O70400 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pdlim1O70400 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim1O70400 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Pdlim1O70400 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim1O70400 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim1O70400 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim1O70400 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim1O70400 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim1O70400 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pdlim1O70400 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim1O70400 Syt7-205ENSMUST00000224135 1557 ntBASIC13.64□□□□□ -0.23
Pdlim1O70400 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms