Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl13O55038 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl13O55038 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl13O55038 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl13O55038 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl13O55038 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl13O55038 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl13O55038 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.67□□□□□ -0.54
Cxcl13O55038 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl13O55038 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl13O55038 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.67□□□□□ -0.54
Cxcl13O55038 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.67□□□□□ -0.54
Cxcl13O55038 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl13O55038 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl13O55038 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cxcl13O55038 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl13O55038 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl13O55038 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl13O55038 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Cxcl13O55038 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cxcl13O55038 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Cxcl13O55038 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.66□□□□□ -0.54
Cxcl13O55038 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cxcl13O55038 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.66□□□□□ -0.54
Cxcl13O55038 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.66□□□□□ -0.54
Cxcl13O55038 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.66□□□□□ -0.54
Cxcl13O55038 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cxcl13O55038 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.66□□□□□ -0.54
Cxcl13O55038 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.66□□□□□ -0.54
Cxcl13O55038 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.66□□□□□ -0.54
Cxcl13O55038 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.66□□□□□ -0.54
Cxcl13O55038 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.66□□□□□ -0.54
Cxcl13O55038 Gm24447-201ENSMUST00000083977 338 ntBASIC11.66□□□□□ -0.54
Cxcl13O55038 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cxcl13O55038 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.66□□□□□ -0.54
Cxcl13O55038 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cxcl13O55038 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.66□□□□□ -0.54
Cxcl13O55038 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cxcl13O55038 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Cxcl13O55038 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl13O55038 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Cxcl13O55038 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl13O55038 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl13O55038 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl13O55038 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl13O55038 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl13O55038 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl13O55038 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Cxcl13O55038 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl13O55038 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl13O55038 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cxcl13O55038 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl13O55038 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.65□□□□□ -0.54
Cxcl13O55038 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl13O55038 Gm15770-201ENSMUST00000117498 584 ntBASIC11.65□□□□□ -0.54
Cxcl13O55038 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.65□□□□□ -0.54
Cxcl13O55038 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.65□□□□□ -0.54
Cxcl13O55038 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl13O55038 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.65□□□□□ -0.54
Cxcl13O55038 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.65□□□□□ -0.54
Cxcl13O55038 Gm27486-201ENSMUST00000184923 80 ntBASIC11.65□□□□□ -0.54
Cxcl13O55038 Gm44397-201ENSMUST00000195950 113 ntBASIC11.65□□□□□ -0.54
Cxcl13O55038 Gm43438-201ENSMUST00000198133 379 ntBASIC11.65□□□□□ -0.54
Cxcl13O55038 Gm7287-201ENSMUST00000205267 602 ntBASIC11.65□□□□□ -0.54
Cxcl13O55038 Gm18062-201ENSMUST00000208020 547 ntBASIC11.65□□□□□ -0.54
Cxcl13O55038 Gm18055-201ENSMUST00000208254 547 ntBASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms