Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Banf1O54962 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.07□□□□□ -0.16
Banf1O54962 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
Banf1O54962 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Banf1O54962 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.07□□□□□ -0.16
Banf1O54962 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.07□□□□□ -0.16
Banf1O54962 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.07□□□□□ -0.16
Banf1O54962 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Gm43125-201ENSMUST00000201724 730 ntBASIC14.07□□□□□ -0.16
Banf1O54962 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Banf1O54962 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.07□□□□□ -0.16
Banf1O54962 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Banf1O54962 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.06□□□□□ -0.16
Banf1O54962 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Banf1O54962 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Banf1O54962 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Banf1O54962 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.06□□□□□ -0.16
Banf1O54962 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Banf1O54962 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.06□□□□□ -0.16
Banf1O54962 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Banf1O54962 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Banf1O54962 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.06□□□□□ -0.16
Banf1O54962 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.06□□□□□ -0.16
Banf1O54962 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.06□□□□□ -0.16
Banf1O54962 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Banf1O54962 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.06□□□□□ -0.16
Banf1O54962 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.06□□□□□ -0.16
Banf1O54962 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.06□□□□□ -0.16
Banf1O54962 Mir6990-201ENSMUST00000183724 91 ntBASIC14.06□□□□□ -0.16
Banf1O54962 Gm44335-201ENSMUST00000196879 141 ntBASIC14.06□□□□□ -0.16
Banf1O54962 Gm44297-201ENSMUST00000198304 141 ntBASIC14.06□□□□□ -0.16
Banf1O54962 Gm44346-201ENSMUST00000198851 141 ntBASIC14.06□□□□□ -0.16
Banf1O54962 Gm18027-201ENSMUST00000218947 619 ntBASIC14.06□□□□□ -0.16
Banf1O54962 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Banf1O54962 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Banf1O54962 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Banf1O54962 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Banf1O54962 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.06□□□□□ -0.16
Banf1O54962 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Banf1O54962 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Banf1O54962 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Banf1O54962 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Banf1O54962 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Banf1O54962 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Banf1O54962 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Banf1O54962 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Banf1O54962 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Banf1O54962 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.05□□□□□ -0.16
Banf1O54962 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Banf1O54962 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Banf1O54962 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.05□□□□□ -0.16
Banf1O54962 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.05□□□□□ -0.16
Banf1O54962 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Banf1O54962 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Banf1O54962 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Banf1O54962 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Banf1O54962 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Banf1O54962 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Banf1O54962 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Banf1O54962 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Banf1O54962 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Banf1O54962 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Banf1O54962 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Banf1O54962 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.05□□□□□ -0.16
Banf1O54962 Gm37714-201ENSMUST00000194742 342 ntBASIC14.05□□□□□ -0.16
Banf1O54962 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Banf1O54962 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Banf1O54962 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Banf1O54962 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Banf1O54962 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Banf1O54962 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Banf1O54962 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Banf1O54962 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.05□□□□□ -0.16
Banf1O54962 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms