Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC10.94□□□□□ -0.66
Efnb3O35393 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC10.94□□□□□ -0.66
Efnb3O35393 Gm15483-201ENSMUST00000120338 456 ntBASIC10.94□□□□□ -0.66
Efnb3O35393 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Efnb3O35393 Gm2445-201ENSMUST00000182798 989 ntBASIC10.94□□□□□ -0.66
Efnb3O35393 Gm27301-201ENSMUST00000184012 127 ntBASIC10.94□□□□□ -0.66
Efnb3O35393 Gm8000-201ENSMUST00000188378 592 ntBASIC10.94□□□□□ -0.66
Efnb3O35393 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Efnb3O35393 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Efnb3O35393 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Efnb3O35393 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Efnb3O35393 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Efnb3O35393 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Efnb3O35393 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Efnb3O35393 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Efnb3O35393 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Efnb3O35393 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Efnb3O35393 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Efnb3O35393 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Efnb3O35393 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC10.94□□□□□ -0.66
Efnb3O35393 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Efnb3O35393 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Efnb3O35393 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Efnb3O35393 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.93□□□□□ -0.66
Efnb3O35393 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Efnb3O35393 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Efnb3O35393 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Efnb3O35393 Gm13410-201ENSMUST00000117058 1415 ntBASIC10.93□□□□□ -0.66
Efnb3O35393 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Efnb3O35393 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Efnb3O35393 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Efnb3O35393 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Efnb3O35393 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Efnb3O35393 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Efnb3O35393 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Efnb3O35393 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10.93□□□□□ -0.66
Efnb3O35393 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Efnb3O35393 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Efnb3O35393 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Efnb3O35393 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC10.93□□□□□ -0.66
Efnb3O35393 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Efnb3O35393 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC10.93□□□□□ -0.66
Efnb3O35393 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC10.93□□□□□ -0.66
Efnb3O35393 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC10.93□□□□□ -0.66
Efnb3O35393 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC10.93□□□□□ -0.66
Efnb3O35393 Gm5712-201ENSMUST00000199748 1043 ntBASIC10.93□□□□□ -0.66
Efnb3O35393 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Efnb3O35393 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Efnb3O35393 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Efnb3O35393 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Efnb3O35393 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC10.93□□□□□ -0.66
Efnb3O35393 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Efnb3O35393 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Efnb3O35393 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Efnb3O35393 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Efnb3O35393 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Efnb3O35393 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Efnb3O35393 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Efnb3O35393 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Efnb3O35393 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Efnb3O35393 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.92□□□□□ -0.66
Efnb3O35393 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC10.92□□□□□ -0.66
Efnb3O35393 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
Efnb3O35393 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Efnb3O35393 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Efnb3O35393 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Efnb3O35393 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Gm10305-201ENSMUST00000195331 2475 ntBASIC10.92□□□□□ -0.66
Efnb3O35393 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC10.92□□□□□ -0.66
Efnb3O35393 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC10.92□□□□□ -0.66
Efnb3O35393 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC10.92□□□□□ -0.66
Efnb3O35393 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Efnb3O35393 Gm12260-201ENSMUST00000122447 411 ntBASIC10.92□□□□□ -0.66
Efnb3O35393 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC10.92□□□□□ -0.66
Efnb3O35393 Gm5177-201ENSMUST00000183092 997 ntBASIC10.92□□□□□ -0.66
Efnb3O35393 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC10.92□□□□□ -0.66
Efnb3O35393 Gm44608-201ENSMUST00000206827 855 ntBASIC10.92□□□□□ -0.66
Efnb3O35393 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC10.92□□□□□ -0.66
Efnb3O35393 AC174742.1-201ENSMUST00000218272 304 ntBASIC10.92□□□□□ -0.66
Efnb3O35393 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 AC154572.2-201ENSMUST00000225105 997 ntBASIC10.92□□□□□ -0.66
Efnb3O35393 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Efnb3O35393 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms